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The map label for this gene is yerO [H]

Identifier: 49480454

GI number: 49480454

Start: 5177867

End: 5178739

Strand: Reverse

Name: yerO [H]

Synonym: BT9727_5113

Alternate gene names: 49480454

Gene position: 5178739-5177867 (Counterclockwise)

Preceding gene: 49480455

Following gene: 49479000

Centisome position: 98.87

GC content: 32.99

Gene sequence:

>873_bases
ATGAAAGAAAAAGAGCGCTTAATTATAGAGATGGCTATGAAGTTATTTGCGACTAAGGGTGTAAATGCGACATCAGTGCA
GGAAATTGTGACAGCTTGTGGCATATCTAAGGGAGCCTTTTATTTATACTTTAAATCGAAAGAGGAACTTTTATTAGCAA
CACTTCGATATTACTATGACAAGATTCAAAACAAAATGATGGATATTGAACAAGAGTCGTTATTGCCACGTGAAAAATTT
GCAAAACAACTGCATTGCCAGTTTAACGATATACAAAAGCATAAAGAATTCATTATTATGCATGCCAGAGAAAATGCTAT
TCCCTTTAATAAAGAAGTAGAAGAATTTATGATGCGGATGAAGTTAGAGTCTCACGCCTTTTATCGAAATAGTTTACTGT
CTATTTATGGTGATAAGGTTATGCCATATTTATTAGATTTAGTCATTATGGTAGAAGGCATATGCCGTGGATATTTAGAA
CTAATTATTTTACAAGCGCCAGAAATCGACTTATCTTATGTCTCTGCGTTTATTTTGAAAAGAGTAGACGATTTAGTAGA
TGGATTGGTAAAATCTTCGGAAGAACCTGTGTTACATGAAGAAAAGCTTGGAGAATTTCTTTGTAAATCAGAGCTTATTA
AGGAGCAGGTTAAGGAACATTTTTTAAATGAAATTATTGTGTTTAAACGTACATTAGCGGATCAATTAGAAGATGAGGAA
TTGCTTGTTACGTTAGATGTTTTAGAGGCAGAAATGAGGTTACCAAATCCAAGGATTCCGGTTATACAAGGGATGCTGTC
TAATTTAGAAGTATATCCAAATTTAAAAGAATTTCGTTTGAGACTTATGGGCTATTACAATATAAAAAGGTAA

Upstream 100 bases:

>100_bases
CTAATACATAATATAACTGACTGATTGGTCAGCCGTCAATGAAAAGGAATGGTATAATGAATTCATAATAAGATGCGAGA
TTAAATTTAGGAGAGACGAT

Downstream 100 bases:

>100_bases
CAATGATAGTTTTCATTGTTACCTTTTTTATTATGCATTCACTTTTTCTTTTTTCAGTGCAGTCTCTTCTTGGTCAATGT
TGATTGTTTCTTTTACGATA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEQESLLPREKF
AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE
LIILQAPEIDLSYVSAFILKRVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLNEIIVFKRTLADQLEDEE
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR

Sequences:

>Translated_290_residues
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEQESLLPREKF
AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE
LIILQAPEIDLSYVSAFILKRVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLNEIIVFKRTLADQLEDEE
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
>Mature_290_residues
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEQESLLPREKF
AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE
LIILQAPEIDLSYVSAFILKRVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLNEIIVFKRTLADQLEDEE
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 34063; Mature: 34063

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYD
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
KIQNKMMDIEQESLLPREKFAKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRM
HHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
KLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLELIILQAPEIDLSYVSAFILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLNEIIVFKRTLADQLEDEE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
HEEHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYD
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
KIQNKMMDIEQESLLPREKFAKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRM
HHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH
KLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLELIILQAPEIDLSYVSAFILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLNEIIVFKRTLADQLEDEE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
HEEHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]