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The map label for this gene is yktD

Identifier: 49479511

GI number: 49479511

Start: 3087707

End: 3088627

Strand: Reverse

Name: yktD

Synonym: BT9727_3004

Alternate gene names: 49479511

Gene position: 3088627-3087707 (Counterclockwise)

Preceding gene: 49480104

Following gene: 49478091

Centisome position: 58.97

GC content: 35.07

Gene sequence:

>921_bases
ATGTGCGTGAAAAAAGGTGAAGCAAGTATAACGTCGTTAGTATCAGCTTTCGGAAGGGCATATCATAGTGAATTTGATAA
TCCAAAAATCTTTGATGATTATGTAGCTAAAGAGTTCATTTCTCAAAAAGAACGTAACGACATTGAAATGAATATGGTTC
AAGGGATACATTTTTTCAATACAGACATTGCACAGCAGTTTCAAGATAATCTACAAGAAATATTAAAATGGATTACACAA
GTGCAATTATCACCAACACCTTTAGCACGTGCGGCATATTGTGAAAGAGTATTACTACACGAGATTACGCTGGGAACGAA
ACAATACGTTATACTCGGTGCGGGATTAGATACATTTAGTTTTAGACACCGAGAATTAGAAAATAAAATAGAAGTATTTG
AAGTGGATCATCCTTCTACGCAAAAGTTTAAGAAGGAAAGAATAAAAGAAGCGGAACTTGAAGTTCCAAATCACCTTCAT
TTTGTTTCAATGGATTTCACGAAAGGATTTTCCTATGAACAGTTACAGAATGAAGGATTTGAAAATAAAAAGACTTTCTT
TAGTCTTTTAGGTGTTTCATATTATTTAACGAAAGAGGAACTTTCTAGTTTAATAGAATGTCTATTCGAGATGGTTCCAG
AAGGGAGCTCTATCGTTTTCGATTATCCAGATGAAAACTTATTTACAGAAAAGGGACTGTCCAATCGAGTGGAAAATATG
GTGAAAATGGCTGCAATAGGCGGAGAGCCGATGAAATCATGTTTTTCTTATGCCGAAATGGAAGCACTGTTAGAGAAGGC
GGGCTTACTTATTTATGAGCACTTATCACCAGAGGACATAAATACATTATATTTTGAAGGACGAAATGATTATTTAGAAG
CTTTTGAGACGGTGCATTATGTGCATGCGGTGAAGAAGTAA

Upstream 100 bases:

>100_bases
AACTTATTTATGCTATAATTTACCAATATGAAAATAAAGTGTATAATAGGGTTCTCCTGGCCAGGGGAACCCTATTTTTG
TTGTGAAAATGAAGGAGTGT

Downstream 100 bases:

>100_bases
GGAATTAGTAGACATGGGGAGGAATCTCTGTGTCTTTTTTTAAACAAAAGAGAAAATAGAAGATGTTAAAATTACATGTA
TATACGTTCCATATATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MCVKKGEASITSLVSAFGRAYHSEFDNPKIFDDYVAKEFISQKERNDIEMNMVQGIHFFNTDIAQQFQDNLQEILKWITQ
VQLSPTPLARAAYCERVLLHEITLGTKQYVILGAGLDTFSFRHRELENKIEVFEVDHPSTQKFKKERIKEAELEVPNHLH
FVSMDFTKGFSYEQLQNEGFENKKTFFSLLGVSYYLTKEELSSLIECLFEMVPEGSSIVFDYPDENLFTEKGLSNRVENM
VKMAAIGGEPMKSCFSYAEMEALLEKAGLLIYEHLSPEDINTLYFEGRNDYLEAFETVHYVHAVKK

Sequences:

>Translated_306_residues
MCVKKGEASITSLVSAFGRAYHSEFDNPKIFDDYVAKEFISQKERNDIEMNMVQGIHFFNTDIAQQFQDNLQEILKWITQ
VQLSPTPLARAAYCERVLLHEITLGTKQYVILGAGLDTFSFRHRELENKIEVFEVDHPSTQKFKKERIKEAELEVPNHLH
FVSMDFTKGFSYEQLQNEGFENKKTFFSLLGVSYYLTKEELSSLIECLFEMVPEGSSIVFDYPDENLFTEKGLSNRVENM
VKMAAIGGEPMKSCFSYAEMEALLEKAGLLIYEHLSPEDINTLYFEGRNDYLEAFETVHYVHAVKK
>Mature_306_residues
MCVKKGEASITSLVSAFGRAYHSEFDNPKIFDDYVAKEFISQKERNDIEMNMVQGIHFFNTDIAQQFQDNLQEILKWITQ
VQLSPTPLARAAYCERVLLHEITLGTKQYVILGAGLDTFSFRHRELENKIEVFEVDHPSTQKFKKERIKEAELEVPNHLH
FVSMDFTKGFSYEQLQNEGFENKKTFFSLLGVSYYLTKEELSSLIECLFEMVPEGSSIVFDYPDENLFTEKGLSNRVENM
VKMAAIGGEPMKSCFSYAEMEALLEKAGLLIYEHLSPEDINTLYFEGRNDYLEAFETVHYVHAVKK

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 35365; Mature: 35365

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVKKGEASITSLVSAFGRAYHSEFDNPKIFDDYVAKEFISQKERNDIEMNMVQGIHFFN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TDIAQQFQDNLQEILKWITQVQLSPTPLARAAYCERVLLHEITLGTKQYVILGAGLDTFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
FRHRELENKIEVFEVDHPSTQKFKKERIKEAELEVPNHLHFVSMDFTKGFSYEQLQNEGF
HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHCCC
ENKKTFFSLLGVSYYLTKEELSSLIECLFEMVPEGSSIVFDYPDENLFTEKGLSNRVENM
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHH
VKMAAIGGEPMKSCFSYAEMEALLEKAGLLIYEHLSPEDINTLYFEGRNDYLEAFETVHY
HHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHH
VHAVKK
HHHHCC
>Mature Secondary Structure
MCVKKGEASITSLVSAFGRAYHSEFDNPKIFDDYVAKEFISQKERNDIEMNMVQGIHFFN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TDIAQQFQDNLQEILKWITQVQLSPTPLARAAYCERVLLHEITLGTKQYVILGAGLDTFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
FRHRELENKIEVFEVDHPSTQKFKKERIKEAELEVPNHLHFVSMDFTKGFSYEQLQNEGF
HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHCCC
ENKKTFFSLLGVSYYLTKEELSSLIECLFEMVPEGSSIVFDYPDENLFTEKGLSNRVENM
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHH
VKMAAIGGEPMKSCFSYAEMEALLEKAGLLIYEHLSPEDINTLYFEGRNDYLEAFETVHY
HHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHH
VHAVKK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]