Click here to switch to the map view.

The map label for this gene is 49479492

Identifier: 49479492

GI number: 49479492

Start: 3248523

End: 3248999

Strand: Reverse

Name: 49479492

Synonym: BT9727_3175

Alternate gene names: NA

Gene position: 3248999-3248523 (Counterclockwise)

Preceding gene: 49478209

Following gene: 49478208

Centisome position: 62.03

GC content: 33.96

Gene sequence:

>477_bases
ATGAGCGCTTCAAATTTGAATGAAATAAGTAAACAAATTTTAAAAGAAGAGGAAACACTTCAATTTTCCTCTTTTACAAA
TGAAGATGCACTGCAACTAGGTTTATTTATCGTTGAAACAGCAAAGCAAGAGGGAAAAGTGATTGCTGTTGATATAACGA
AAAACGGTGTGCAATTATTTCATTTCAAGATGACAGGGACAAATGAGGAAAATACGAAGTGGATTGAGCGTAAAAAACGA
GTTGTTTCTCTGCATGATCGTAGCTCGTATTATATGCAGATACAAAGTGAAATAACTGGAATTTCATATAATGAAAAATA
TCTTTTAAATACTTCGGAATATGCTGCGTTTGGTGGATGCTTTCCTATCAGAATAAAAGACGTAGGGGTTATTGGAATGA
TAACAGTTTCAGGATTGCCGCCAGAAGAAGATCACGAATTGGTAATAAGAGCAGTTAAAAATCATTTGAACCAATAG

Upstream 100 bases:

>100_bases
ATACGCTTTACGCTATTAGTAATATTGAAAGGTCGTACGATAGAGTCACATAAATTTAAAAATATGAATGTGGCATAAAG
TGATTAAGGAGGATAAAGAT

Downstream 100 bases:

>100_bases
TTATAGCTAGTGAATAGATAATTAATTTTAGGGGGCAATACTATGTCAATAATTGAGTTAAATACTTGGCCAACGATGTC
AACAGAAGAAAAAAGAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSASNLNEISKQILKEEETLQFSSFTNEDALQLGLFIVETAKQEGKVIAVDITKNGVQLFHFKMTGTNEENTKWIERKKR
VVSLHDRSSYYMQIQSEITGISYNEKYLLNTSEYAAFGGCFPIRIKDVGVIGMITVSGLPPEEDHELVIRAVKNHLNQ

Sequences:

>Translated_158_residues
MSASNLNEISKQILKEEETLQFSSFTNEDALQLGLFIVETAKQEGKVIAVDITKNGVQLFHFKMTGTNEENTKWIERKKR
VVSLHDRSSYYMQIQSEITGISYNEKYLLNTSEYAAFGGCFPIRIKDVGVIGMITVSGLPPEEDHELVIRAVKNHLNQ
>Mature_157_residues
SASNLNEISKQILKEEETLQFSSFTNEDALQLGLFIVETAKQEGKVIAVDITKNGVQLFHFKMTGTNEENTKWIERKKRV
VSLHDRSSYYMQIQSEITGISYNEKYLLNTSEYAAFGGCFPIRIKDVGVIGMITVSGLPPEEDHELVIRAVKNHLNQ

Specific function: Unknown

COG id: COG4702

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0303 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319613, Length=147, Percent_Identity=31.2925170068027, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005624
- InterPro:   IPR010371 [H]

Pfam domain/function: PF03928 DUF336 [H]

EC number: NA

Molecular weight: Translated: 17915; Mature: 17783

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASNLNEISKQILKEEETLQFSSFTNEDALQLGLFIVETAKQEGKVIAVDITKNGVQLF
CCCCHHHHHHHHHHCHHHHEEECCCCCCCHHHHHHHEEEECCCCCCEEEEEEECCCEEEE
HFKMTGTNEENTKWIERKKRVVSLHDRSSYYMQIQSEITGISYNEKYLLNTSEYAAFGGC
EEEECCCCCCCHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCHHHHCCE
FPIRIKDVGVIGMITVSGLPPEEDHELVIRAVKNHLNQ
EEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SASNLNEISKQILKEEETLQFSSFTNEDALQLGLFIVETAKQEGKVIAVDITKNGVQLF
CCCHHHHHHHHHHCHHHHEEECCCCCCCHHHHHHHEEEECCCCCCEEEEEEECCCEEEE
HFKMTGTNEENTKWIERKKRVVSLHDRSSYYMQIQSEITGISYNEKYLLNTSEYAAFGGC
EEEECCCCCCCHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCHHHHCCE
FPIRIKDVGVIGMITVSGLPPEEDHELVIRAVKNHLNQ
EEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA