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The map label for this gene is yfhB [H]

Identifier: 49479311

GI number: 49479311

Start: 3314294

End: 3315151

Strand: Reverse

Name: yfhB [H]

Synonym: BT9727_3249

Alternate gene names: 49479311

Gene position: 3315151-3314294 (Counterclockwise)

Preceding gene: 49480848

Following gene: 49478251

Centisome position: 63.29

GC content: 34.27

Gene sequence:

>858_bases
ATGAAACTATCCGTGTATGTTGCAAGTGCATTTAGCAAGGATCATAAAGGCGGAAATAAAGCAGGAGTGGTATTTATTGA
GAATGCATTGACCACTACTCAAAAAATGGCAATAGCCAAACAACTGGGTTATGCGGAAACCGCATTTATATCAGGATCTG
AAATTGCAGATTATAAATTTGAGTATTTTACACCAAAAGAAGAAGTTGATTTATGTGGTCATGCTACAATTGGCTCTTTC
GCGATACTGATGCATTTAAATAAACTTTTCAGGAATCGCTATACAATTGAAACAAACAGCGGTGTTCTTACTATTACCAT
AAAAGATGACAGCATATTCATGGAACAAAACAACCCGATATTCTATGATGTTGTATCTCCAAACGAGTTCATCGACTGTT
TTGACATGAAAGCTATAGATAATAAATATCCAATTCAAATTGTCTCCACAGGCTTAAAAGATATTTTAATTCCTATAAAA
AGCGAAACACGATTACATGCACTGCAACCTAGTTTTGAAAAAATTAAAGAAATCAGCAAGTATTATAATGTTGTCGGGAT
GCATCTATATACTTTTAATGACGATCGAATTATATGCAGGAATTTTGCGCCACTATACGACATTAATGAAGAAGCAGCGA
CTGGAACTTCAAATGGTGCATTAGCTTGCTACCTTCATGAACAGCACAACTTGCAAAAAGAAGTCTATGTATTTGAACAA
GGTTATTCTTTGCAATCGCCTTCTGAAATATTAGTTAAATTAGCAACCAATAGCAAGAATGAAATAGAAAAGGTTTATGT
TGGCGGCAAAGGCTATTACTGTGAAACTAAGTGTTTAAATGTAGAAAATATGGAGTGA

Upstream 100 bases:

>100_bases
GAAAAAATAGTTTGTCTCTTGTTTTATGGGAATATATCCAACGAAATTTATACGCAGTACTTTCTATACTACAATTTACT
ATAAGTGAGGAAGGTGTCTT

Downstream 100 bases:

>100_bases
AAATAAAAACAACGAATAAAAAGGTTGAGAAAATACTTTCTCAACCTCGGACTGTAGACAAAGTATCTGATTATTCGATG
CTTTGTCTTTTTTCTTTGTA

Product: phenazine biosynthesis PhzC/PhzF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKLSVYVASAFSKDHKGGNKAGVVFIENALTTTQKMAIAKQLGYAETAFISGSEIADYKFEYFTPKEEVDLCGHATIGSF
AILMHLNKLFRNRYTIETNSGVLTITIKDDSIFMEQNNPIFYDVVSPNEFIDCFDMKAIDNKYPIQIVSTGLKDILIPIK
SETRLHALQPSFEKIKEISKYYNVVGMHLYTFNDDRIICRNFAPLYDINEEAATGTSNGALACYLHEQHNLQKEVYVFEQ
GYSLQSPSEILVKLATNSKNEIEKVYVGGKGYYCETKCLNVENME

Sequences:

>Translated_285_residues
MKLSVYVASAFSKDHKGGNKAGVVFIENALTTTQKMAIAKQLGYAETAFISGSEIADYKFEYFTPKEEVDLCGHATIGSF
AILMHLNKLFRNRYTIETNSGVLTITIKDDSIFMEQNNPIFYDVVSPNEFIDCFDMKAIDNKYPIQIVSTGLKDILIPIK
SETRLHALQPSFEKIKEISKYYNVVGMHLYTFNDDRIICRNFAPLYDINEEAATGTSNGALACYLHEQHNLQKEVYVFEQ
GYSLQSPSEILVKLATNSKNEIEKVYVGGKGYYCETKCLNVENME
>Mature_285_residues
MKLSVYVASAFSKDHKGGNKAGVVFIENALTTTQKMAIAKQLGYAETAFISGSEIADYKFEYFTPKEEVDLCGHATIGSF
AILMHLNKLFRNRYTIETNSGVLTITIKDDSIFMEQNNPIFYDVVSPNEFIDCFDMKAIDNKYPIQIVSTGLKDILIPIK
SETRLHALQPSFEKIKEISKYYNVVGMHLYTFNDDRIICRNFAPLYDINEEAATGTSNGALACYLHEQHNLQKEVYVFEQ
GYSLQSPSEILVKLATNSKNEIEKVYVGGKGYYCETKCLNVENME

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Homo sapiens, GI62177133, Length=280, Percent_Identity=27.8571428571429, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI74316009, Length=256, Percent_Identity=28.515625, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1787737, Length=284, Percent_Identity=30.6338028169014, Blast_Score=117, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6321818, Length=231, Percent_Identity=28.1385281385281, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 32230; Mature: 32230

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSVYVASAFSKDHKGGNKAGVVFIENALTTTQKMAIAKQLGYAETAFISGSEIADYKF
CEEEEEEEEHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEE
EYFTPKEEVDLCGHATIGSFAILMHLNKLFRNRYTIETNSGVLTITIKDDSIFMEQNNPI
EEECCHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCEEEEECCCCE
FYDVVSPNEFIDCFDMKAIDNKYPIQIVSTGLKDILIPIKSETRLHALQPSFEKIKEISK
EEEECCCCHHEEHCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCHHHHHHHHH
YYNVVGMHLYTFNDDRIICRNFAPLYDINEEAATGTSNGALACYLHEQHNLQKEVYVFEQ
HHHEEEEEEEEECCCEEEEECCCCCEECCCHHCCCCCCCEEEEEEECCCCCCEEEEEEEC
GYSLQSPSEILVKLATNSKNEIEKVYVGGKGYYCETKCLNVENME
CCCCCCCHHHEEEEECCCCCCEEEEEECCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MKLSVYVASAFSKDHKGGNKAGVVFIENALTTTQKMAIAKQLGYAETAFISGSEIADYKF
CEEEEEEEEHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEE
EYFTPKEEVDLCGHATIGSFAILMHLNKLFRNRYTIETNSGVLTITIKDDSIFMEQNNPI
EEECCHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCEEEEECCCCE
FYDVVSPNEFIDCFDMKAIDNKYPIQIVSTGLKDILIPIKSETRLHALQPSFEKIKEISK
EEEECCCCHHEEHCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCHHHHHHHHH
YYNVVGMHLYTFNDDRIICRNFAPLYDINEEAATGTSNGALACYLHEQHNLQKEVYVFEQ
HHHEEEEEEEEECCCEEEEECCCCCEECCCHHCCCCCCCEEEEEEECCCCCCEEEEEEEC
GYSLQSPSEILVKLATNSKNEIEKVYVGGKGYYCETKCLNVENME
CCCCCCCHHHEEEEECCCCCCEEEEEECCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]