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The map label for this gene is 49478919

Identifier: 49478919

GI number: 49478919

Start: 4940927

End: 4941376

Strand: Reverse

Name: 49478919

Synonym: BT9727_4893

Alternate gene names: NA

Gene position: 4941376-4940927 (Counterclockwise)

Preceding gene: 49481192

Following gene: 49478918

Centisome position: 94.34

GC content: 33.78

Gene sequence:

>450_bases
ATGAAAGTTCGCATCGAATTGGACCCATCACAAGACGAAGTAGAAATTATTATAAAAACAAAAGAAGTAACAGATGAAAT
TCAGCAGATTTTAAAAATAATTGAAGGAGGGAATGTGAATCAAATTGTTGGTGTGTTAAATCAGCAGTATTATTTATTGA
ATTTAAATGATATTTATTGGTTCTATACAGAAGAGAGAAAAGTTATGGCGCAAACGAAGAAAGGGAGTCTTGAGGTGAAG
GCTCGCCTATATGAATTAGAAGAACAGTTAGCTGCAAAGCGTTTTGCTAGATTTTCTAAGTCGATACTTGCAAATTTAGG
GCATGTCAAAAGCTTTGAAATGTCTTTTAGTGGCAGTATGTGTGCCCATTTTTCTAATGGAATGAAAGAATATGTTTCAA
GGAAATATGTACCGCTCATTAAGGAAGCTTTAAATATAGGGGGAGGTTAA

Upstream 100 bases:

>100_bases
AAAGATACTGTTATGGCAAAAAGAGAACCACTTACGCATAATTTTATTTATCGTTTCCAAATTTATGTAAAAATGAAGTT
GTAAAGGGGGTGGGAAGTAT

Downstream 100 bases:

>100_bases
AAGATGTTTGATAGAATAGTTAATAAAATAGCCTTTGGACTCGGGATGGCGATGGTATATAGTCTATTGTTTTTATGGAT
TGGTTATGTAAAAGGAATGG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKVRIELDPSQDEVEIIIKTKEVTDEIQQILKIIEGGNVNQIVGVLNQQYYLLNLNDIYWFYTEERKVMAQTKKGSLEVK
ARLYELEEQLAAKRFARFSKSILANLGHVKSFEMSFSGSMCAHFSNGMKEYVSRKYVPLIKEALNIGGG

Sequences:

>Translated_149_residues
MKVRIELDPSQDEVEIIIKTKEVTDEIQQILKIIEGGNVNQIVGVLNQQYYLLNLNDIYWFYTEERKVMAQTKKGSLEVK
ARLYELEEQLAAKRFARFSKSILANLGHVKSFEMSFSGSMCAHFSNGMKEYVSRKYVPLIKEALNIGGG
>Mature_149_residues
MKVRIELDPSQDEVEIIIKTKEVTDEIQQILKIIEGGNVNQIVGVLNQQYYLLNLNDIYWFYTEERKVMAQTKKGSLEVK
ARLYELEEQLAAKRFARFSKSILANLGHVKSFEMSFSGSMCAHFSNGMKEYVSRKYVPLIKEALNIGGG

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH LytTR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007492 [H]

Pfam domain/function: PF04397 LytTR [H]

EC number: NA

Molecular weight: Translated: 17084; Mature: 17084

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRIELDPSQDEVEIIIKTKEVTDEIQQILKIIEGGNVNQIVGVLNQQYYLLNLNDIYW
CEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCEEE
FYTEERKVMAQTKKGSLEVKARLYELEEQLAAKRFARFSKSILANLGHVKSFEMSFSGSM
EEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
CAHFSNGMKEYVSRKYVPLIKEALNIGGG
HHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKVRIELDPSQDEVEIIIKTKEVTDEIQQILKIIEGGNVNQIVGVLNQQYYLLNLNDIYW
CEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCEEE
FYTEERKVMAQTKKGSLEVKARLYELEEQLAAKRFARFSKSILANLGHVKSFEMSFSGSM
EEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
CAHFSNGMKEYVSRKYVPLIKEALNIGGG
HHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]