Click here to switch to the map view.

The map label for this gene is licB

Identifier: 49478917

GI number: 49478917

Start: 4938105

End: 4938407

Strand: Reverse

Name: licB

Synonym: BT9727_4889

Alternate gene names: 49478917

Gene position: 4938407-4938105 (Counterclockwise)

Preceding gene: 49478918

Following gene: 49481181

Centisome position: 94.29

GC content: 38.94

Gene sequence:

>303_bases
ATGAATATTTTATTATGTTGCTCAGCAGGGATGTCTACAAGTTTACTAGTTACAAAAATGGAGGCGGCTGCAAAAGCTCG
CGGTTTAGAAGGAAAGATTTGGGCTGTATCTGGGGATGCAGTAAAAACAAATATCGATCAAGCAGACGTACTATTATTAG
GACCACAAGTTCGTTACATGCTTTCTTCAATGAAAACGCTTGCTGATGAGAAGAACGTTGGAATCGACGTTATCAATCCA
ATGCACTACGGCATGATGAATGGAGAAGCAGTTTTAGATCACGCGTTAACACTTAAAAAATAA

Upstream 100 bases:

>100_bases
AGCGGTTTTAAAAAGTTGGCACGTTAATTGCATTAATAAATAGCGTAAAGAAAAATAAATAAAACATAAATTTTTTATAC
TACACAAGGGGGATTTTCAA

Downstream 100 bases:

>100_bases
TTAGGGGGGAAGTAAAATGCAAAAGTTTATTGCATTTATGGAGAAGTACATGGTTCCGATTGCTGGTAAAATCGGATCGC
AACGTCACTTAGCTGCGATC

Product: PTS systemlichenan-specific transporter subunit IIB (phosphotransferase system protein)

Products: NA

Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MNILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADEKNVGIDVINP
MHYGMMNGEAVLDHALTLKK

Sequences:

>Translated_100_residues
MNILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADEKNVGIDVINP
MHYGMMNGEAVLDHALTLKK
>Mature_100_residues
MNILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADEKNVGIDVINP
MHYGMMNGEAVLDHALTLKK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=91, Percent_Identity=43.956043956044, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10723; Mature: 10723

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYM
CCEEEEECCCCCCCCEEEHHHHHHHHCCCCCEEEEEECCEEECCCCCCCEEEECHHHHHH
LSSMKTLADEKNVGIDVINPMHYGMMNGEAVLDHALTLKK
HHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHEECCC
>Mature Secondary Structure
MNILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYM
CCEEEEECCCCCCCCEEEHHHHHHHHCCCCCEEEEEECCEEECCCCCCCEEEECHHHHHH
LSSMKTLADEKNVGIDVINPMHYGMMNGEAVLDHALTLKK
HHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407820 [H]