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The map label for this gene is 49478657

Identifier: 49478657

GI number: 49478657

Start: 4287000

End: 4287638

Strand: Reverse

Name: 49478657

Synonym: BT9727_4223

Alternate gene names: NA

Gene position: 4287638-4287000 (Counterclockwise)

Preceding gene: 49478658

Following gene: 49478654

Centisome position: 81.86

GC content: 30.83

Gene sequence:

>639_bases
ATGAGAAAAGTTGCTTGTGCAAATACTTATATTAATAAAATCAAGCCCGTTATTAGAAAAACGAGTTTTAGCCAATTAAA
AATAGATGAAATTGCGAAATATATGGATATTAGTAAAGCTACTTTATATAAACGTTTTTCTTCAAAAGATGAGATTATTG
AAGCGGTGGTAGAAGATTTTATGAACTACCTTCTTGAAGGAGATGCGGATAATCAAGACGAAAGTATGTCTTTTGCAGAA
CGTTTCCAAAAGACGTTTATTCACTCTTTAAAATGTGTGACATACATTTCTGATGTCTTTTTACAAGATTTGAAAGAGGC
ATATCCGCACTTATCTGATCAGCTAGTCGCTGCACAACAAAATCGTAATCATAATTTGCAAATGTTTTTTGAAGCGGGTA
TGGAACAAGGTTACTTTAATAAAATGAACGCACAATTATTTATGGTGCAAGATGATGTGATGTTAAGACGTATTATAGAT
CATTCTTTTTGTATTCAGTACGATATTACGTTAAAGAAAGCGATACTTGATTTTTATCAATTAAAGAAGTATCAACTGTT
TAAACCGGAGTATATAGAAGTGATTGATGATTCGGAAATTGAAAAAGAAGTTATGGCTATTTTGCAAATGATTTCGTAA

Upstream 100 bases:

>100_bases
CCCTTAAACTAAAAATATATATTGAGTATAGTGACTTCATTTATAATTAATCGTGAATTTGCTATACTATTTTGTATGGA
CAAAAGGGGAGGCTCTTTTA

Downstream 100 bases:

>100_bases
AAAAGCAGGTTTTCCTATAGTAATGGAAAACCTGCTTTTTTATTACATGTTATTTTTTATGTGTTGTAATACTAATTCAG
CTACTGGACCACCTGAAGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDFMNYLLEGDADNQDESMSFAE
RFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQNRNHNLQMFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIID
HSFCIQYDITLKKAILDFYQLKKYQLFKPEYIEVIDDSEIEKEVMAILQMIS

Sequences:

>Translated_212_residues
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDFMNYLLEGDADNQDESMSFAE
RFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQNRNHNLQMFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIID
HSFCIQYDITLKKAILDFYQLKKYQLFKPEYIEVIDDSEIEKEVMAILQMIS
>Mature_212_residues
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDFMNYLLEGDADNQDESMSFAE
RFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQNRNHNLQMFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIID
HSFCIQYDITLKKAILDFYQLKKYQLFKPEYIEVIDDSEIEKEVMAILQMIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25019; Mature: 25019

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MNYLLEGDADNQDESMSFAERFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NRNHNLQMFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIIDHSFCIQYDITLKKAILDFYQ
CCCCCHHHHHHHCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHEEECHHHHHHHHHHHH
LKKYQLFKPEYIEVIDDSEIEKEVMAILQMIS
HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MRKVACANTYINKIKPVIRKTSFSQLKIDEIAKYMDISKATLYKRFSSKDEIIEAVVEDF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MNYLLEGDADNQDESMSFAERFQKTFIHSLKCVTYISDVFLQDLKEAYPHLSDQLVAAQQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NRNHNLQMFFEAGMEQGYFNKMNAQLFMVQDDVMLRRIIDHSFCIQYDITLKKAILDFYQ
CCCCCHHHHHHHCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHEEECHHHHHHHHHHHH
LKKYQLFKPEYIEVIDDSEIEKEVMAILQMIS
HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA