Click here to switch to the map view.

The map label for this gene is 49478545

Identifier: 49478545

GI number: 49478545

Start: 3954466

End: 3954993

Strand: Reverse

Name: 49478545

Synonym: BT9727_3870

Alternate gene names: NA

Gene position: 3954993-3954466 (Counterclockwise)

Preceding gene: 49478546

Following gene: 49478544

Centisome position: 75.51

GC content: 24.62

Gene sequence:

>528_bases
ATGAGAATATTAAATGTTTTTGATGCAGTTAGAGAAGGGGATTTTGAAGACTTTAAAAAAATTTATGATGGTGATATTAA
TCAAATTGATAGTGATTTAGATATTAATTTATTGTGCATGGCTTTGACTAATAATAAAAATTCTAGTGAAAAACTTAAAA
TTATAAAATTTTTACTAGAAGAGGGTATTGATATTAATTACACTACAGCTAAAGATAAAAGGAATGCATTGCATATGTTT
TATTTTTGTGTTTTACGCCCAACAATAGAATATGAATTAGAGATAACAAGACTACTTATTGATAATAAAATTAATATAAA
TGCTTTGGATAAATATAATGCTATTCCTTTGAAGTATGCTATTACAATAAATAAATTGCCTACAGAAGACAATAAAGACA
TGTATAAACTACTTATTAAAAAGGGTTCAAACTATAATTTGAAAGATCAATTTGGAAAATCATGTGTGGATTATGCTAAA
GAGTACTCTTGGAGAAATGATTTATTAACTATTATTGAGGAGTGTTAA

Upstream 100 bases:

>100_bases
ATATTTCAAAAATAAACGATAAGACTCATAAATATTGTGGGATTTGAAGTAAAATAAGTATATAGAAGTCATAAATATGA
ATATTTAGGAAGATGATGGA

Downstream 100 bases:

>100_bases
TATGAAAGTAAATAATTCTGATTACGGGACTATTATAAAATTCGGGAATCTTGAATTATTTGTAGAGAAGCTAAAAATTG
AGGGGAACTGTATTGAAGAG

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRILNVFDAVREGDFEDFKKIYDGDINQIDSDLDINLLCMALTNNKNSSEKLKIIKFLLEEGIDINYTTAKDKRNALHMF
YFCVLRPTIEYELEITRLLIDNKININALDKYNAIPLKYAITINKLPTEDNKDMYKLLIKKGSNYNLKDQFGKSCVDYAK
EYSWRNDLLTIIEEC

Sequences:

>Translated_175_residues
MRILNVFDAVREGDFEDFKKIYDGDINQIDSDLDINLLCMALTNNKNSSEKLKIIKFLLEEGIDINYTTAKDKRNALHMF
YFCVLRPTIEYELEITRLLIDNKININALDKYNAIPLKYAITINKLPTEDNKDMYKLLIKKGSNYNLKDQFGKSCVDYAK
EYSWRNDLLTIIEEC
>Mature_175_residues
MRILNVFDAVREGDFEDFKKIYDGDINQIDSDLDINLLCMALTNNKNSSEKLKIIKFLLEEGIDINYTTAKDKRNALHMF
YFCVLRPTIEYELEITRLLIDNKININALDKYNAIPLKYAITINKLPTEDNKDMYKLLIKKGSNYNLKDQFGKSCVDYAK
EYSWRNDLLTIIEEC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20528; Mature: 20528

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILNVFDAVREGDFEDFKKIYDGDINQIDSDLDINLLCMALTNNKNSSEKLKIIKFLLE
CCHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
EGIDINYTTAKDKRNALHMFYFCVLRPTIEYELEITRLLIDNKININALDKYNAIPLKYA
CCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCEEECCCCCCCEEEEE
ITINKLPTEDNKDMYKLLIKKGSNYNLKDQFGKSCVDYAKEYSWRNDLLTIIEEC
EEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MRILNVFDAVREGDFEDFKKIYDGDINQIDSDLDINLLCMALTNNKNSSEKLKIIKFLLE
CCHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
EGIDINYTTAKDKRNALHMFYFCVLRPTIEYELEITRLLIDNKININALDKYNAIPLKYA
CCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCEEECCCCCCCEEEEE
ITINKLPTEDNKDMYKLLIKKGSNYNLKDQFGKSCVDYAKEYSWRNDLLTIIEEC
EEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA