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The map label for this gene is 49478477

Identifier: 49478477

GI number: 49478477

Start: 3253442

End: 3253855

Strand: Reverse

Name: 49478477

Synonym: BT9727_3180

Alternate gene names: NA

Gene position: 3253855-3253442 (Counterclockwise)

Preceding gene: 49481597

Following gene: 49478211

Centisome position: 62.12

GC content: 36.71

Gene sequence:

>414_bases
ATGAGCAGCGACTTTACCTTGGCCATACACAGTTTAACTTATTTAGCTTTACAGCCAGACCGGATGTCAACAAGTAATGC
GATTTCAGAAAGTGCAGGTGTTCACCCAGTACGTATTCGCAAAGTACTAGGTTTATTAAAAAAACATAAGTTTATACAAT
CAAAAGAGGGGACCGGTGGAGGTTTTATTTTTGCTCGGGATTTAGATGAAGTTAATCTATGGCATATTTATCAAATAACC
TCTGAAGGTGCGTTGCAGCCTAAGTGCCCAGAATCAAATGATCAGTGCATTGTAGGTTCAAACATGCGAAAAGTGCTGTT
TACTATTTTCTTAGGTGCGGAAGAATATTTAGGTGAATATTTAAAGAACTATACAATGAAAGAAGTTGTTGATCTTATCA
ATCAAGAACGTTAA

Upstream 100 bases:

>100_bases
TTCTTATATATTTTAACGTTCAACTAACCTATCTGTAATGTTTATGGCTACAGTATGTTAATATAGGAGAAACAATATTT
TTGATCGTAGGAGGAAAACA

Downstream 100 bases:

>100_bases
GCGGCTTACTTGTTATATAGAGACGTAAGTTCTTACTGTTTAAATGTAATAGAAAATATTACAGTTTGATTTTGTTTTTA
TTTCTTTTTTATCGCCACAA

Product: transcriptional regulator

Products: NA

Alternate protein names: BadM/Rrf2 Family Transcriptional Regulator; Rrf2 Family Protein; Transcriptional Regulator; Rrf2 Family Transcriptional Regulator; Superfamily; Transcriptional Regulator Rrf2 Family Protein; Transcriptional Regulator Rrf2 Family; LOW QUALITY PROTEIN Transcriptional Regulator; Probably Rrf2 Family Transcriptional Regulator

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSSDFTLAIHSLTYLALQPDRMSTSNAISESAGVHPVRIRKVLGLLKKHKFIQSKEGTGGGFIFARDLDEVNLWHIYQIT
SEGALQPKCPESNDQCIVGSNMRKVLFTIFLGAEEYLGEYLKNYTMKEVVDLINQER

Sequences:

>Translated_137_residues
MSSDFTLAIHSLTYLALQPDRMSTSNAISESAGVHPVRIRKVLGLLKKHKFIQSKEGTGGGFIFARDLDEVNLWHIYQIT
SEGALQPKCPESNDQCIVGSNMRKVLFTIFLGAEEYLGEYLKNYTMKEVVDLINQER
>Mature_136_residues
SSDFTLAIHSLTYLALQPDRMSTSNAISESAGVHPVRIRKVLGLLKKHKFIQSKEGTGGGFIFARDLDEVNLWHIYQITS
EGALQPKCPESNDQCIVGSNMRKVLFTIFLGAEEYLGEYLKNYTMKEVVDLINQER

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15453; Mature: 15322

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDFTLAIHSLTYLALQPDRMSTSNAISESAGVHPVRIRKVLGLLKKHKFIQSKEGTGG
CCCCCEEHHHHHEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GFIFARDLDEVNLWHIYQITSEGALQPKCPESNDQCIVGSNMRKVLFTIFLGAEEYLGEY
CEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCHHHHHHH
LKNYTMKEVVDLINQER
HHCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SSDFTLAIHSLTYLALQPDRMSTSNAISESAGVHPVRIRKVLGLLKKHKFIQSKEGTGG
CCCCEEHHHHHEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
GFIFARDLDEVNLWHIYQITSEGALQPKCPESNDQCIVGSNMRKVLFTIFLGAEEYLGEY
CEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCHHHHHHH
LKNYTMKEVVDLINQER
HHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA