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The map label for this gene is ylxY [H]

Identifier: 49478385

GI number: 49478385

Start: 3640078

End: 3640977

Strand: Reverse

Name: ylxY [H]

Synonym: BT9727_3547

Alternate gene names: 49478385

Gene position: 3640977-3640078 (Counterclockwise)

Preceding gene: 49478386

Following gene: 49478384

Centisome position: 69.52

GC content: 35.56

Gene sequence:

>900_bases
ATGAAAGCTCGTATATTGGCATACATATGTATATTCTTTTTATATGTCAGTGTAGGCTCTTATTCCGTTTTTGCACAGGA
TAACTTATATGAAGAAATTCAAAAGTATGCAAAACAATATGAGATTGCACCACAAAATGCGATGATTGATAAGATATGGA
AAGCAACACCAGGATATAATGGAAGACAAGTTGATATGGAAGCATCCTATAACAATATGAAGAAGTTAAAGAAATTTGAT
CAAAAACATCTTGAATTCAAGGAAGTATCGCCGAGTGTCCACTTAGAAGATTTATCACCAGCGCCAATTTATAGAGGGCA
TCCAAATAAAAAGATGGTGGGATTAACAATAAATGTGGCATGGGGAAATGAATATTTGCCTCGTATATTAGAGATATTGA
AAAAACATGATGTGAAGGCAACTTTCTTTTTAGAAGGACGTTGGGTGAAAGAAAATTTACGATTTGCAAAAATGATTGTC
GATGCAAACCAAGAAGTCGGAAATCATTCTTACACACATCCGAATATGAAAACGCTATCGTCTGATGAAATACGAGATCA
GTTGCAAAAAACAAATCGAATGATTGAAGCAGCTACGAATCAAAAGGTAAGATGGTTTGCACCGCCGAGTGGAAGTTTTC
GGGATGAAGTCGTGAAAATTGCAGATGATTTTCAAATGGGAACGATTATGTGGACTGTTGATACAATTGATTGGAAGCGA
CCTGAGCCAGATGTACTATTGCAGAGAGTAATGAGAAAAATACATCCAGGTGCTATCGTATTAATGCACCCTACTTCGTC
AACAACAGAAGCTTTAGACACAATGATTACAAAATTGAAGGAACAAGGATATAAAGTAGGGAATATAACAGAATTACTGG
ATGAAAAACGTGTGGATTAA

Upstream 100 bases:

>100_bases
TATATTTTTATGTCAGTATAGGTATAGTTTTTATTATAACGCTCAAATTAACAAAGATAAGAAGAAAAATGGTTTTTATA
TAGTTAATGGGAGGGTTTAT

Downstream 100 bases:

>100_bases
ATACATTTGCATGACATTCATCCTTAAACTTGTTATCATTAAATAATAGCATTTATTTAGAGAAACTGGCAGTAGGAGGA
AAGTTTTTGATTAAAAAATA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKYAKQYEIAPQNAMIDKIWKATPGYNGRQVDMEASYNNMKKLKKFD
QKHLEFKEVSPSVHLEDLSPAPIYRGHPNKKMVGLTINVAWGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIV
DANQEVGNHSYTHPNMKTLSSDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
PEPDVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD

Sequences:

>Translated_299_residues
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKYAKQYEIAPQNAMIDKIWKATPGYNGRQVDMEASYNNMKKLKKFD
QKHLEFKEVSPSVHLEDLSPAPIYRGHPNKKMVGLTINVAWGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIV
DANQEVGNHSYTHPNMKTLSSDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
PEPDVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD
>Mature_299_residues
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKYAKQYEIAPQNAMIDKIWKATPGYNGRQVDMEASYNNMKKLKKFD
QKHLEFKEVSPSVHLEDLSPAPIYRGHPNKKMVGLTINVAWGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIV
DANQEVGNHSYTHPNMKTLSSDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
PEPDVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 34661; Mature: 34661

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKYAKQYEIAPQNAMIDKIWKATPGYN
CCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GRQVDMEASYNNMKKLKKFDQKHLEFKEVSPSVHLEDLSPAPIYRGHPNKKMVGLTINVA
CEEEEECCCHHHHHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEE
WGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIVDANQEVGNHSYTHPNMKTLS
CCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
SDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
PEPDVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD
CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKARILAYICIFFLYVSVGSYSVFAQDNLYEEIQKYAKQYEIAPQNAMIDKIWKATPGYN
CCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GRQVDMEASYNNMKKLKKFDQKHLEFKEVSPSVHLEDLSPAPIYRGHPNKKMVGLTINVA
CEEEEECCCHHHHHHHHHHHHHHCHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEE
WGNEYLPRILEILKKHDVKATFFLEGRWVKENLRFAKMIVDANQEVGNHSYTHPNMKTLS
CCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
SDEIRDQLQKTNRMIEAATNQKVRWFAPPSGSFRDEVVKIADDFQMGTIMWTVDTIDWKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCC
PEPDVLLQRVMRKIHPGAIVLMHPTSSTTEALDTMITKLKEQGYKVGNITELLDEKRVD
CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]