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The map label for this gene is ydhB [H]

Identifier: 49478322

GI number: 49478322

Start: 3511251

End: 3512006

Strand: Reverse

Name: ydhB [H]

Synonym: BT9727_3428

Alternate gene names: 49478322

Gene position: 3512006-3511251 (Counterclockwise)

Preceding gene: 49478323

Following gene: 49478321

Centisome position: 67.05

GC content: 36.38

Gene sequence:

>756_bases
GTGGCAATTATTATAACGATGTTAGTAATGGGGATTTTATTAGGGTTTGTTGGAGCTGGGGGAGCCGGGTTTATTATCGC
GATACTCACTTTAGTATTCCATATTCCTATTCACGTTGCACTTGCAACGTCTTTAACTGCTATGGCATTTACGACATTAT
CTGGGGTTATAAGTCATTATCGTGAAGGAAATGTAGTACTTACTATAGGCGGGATTGTTGGTGGATGTGGGGCATTTGGT
TCTTATATCGGTTCCAAAATTGGCTCGCTTATACCACCGTATCTTCTTCATTGGTTTACAGCTGGGATGTTATTTTTATC
TGCAATTTTTATGTTTATTAAATTAATTAAGTTTCAAAATAGGGAAGAGTTACTTTTAGCAGAGATTAAAGATTTTTCGA
AAGAGAACATAATGAAATGTATATGTCTTGGATTAGTCACTGGAATGATGGCTGGTTCATTCGGGATTGGTTCTGCACCA
TTTATTCAACTTGGATTAATGGTTCTATTAGGATTAACGATTCAGCAATCTGTAGGAACAACAATGCTTGTTATATTGCC
AATTGCGATTGGAGGTGGGCTAGGATATAGTTCAGAAGGCTACCTAGATCATATATTATTATTGCAAGTATTAATTGGGA
CGATGTTAGGAGCGTATATTGGGGCGAAGTTTACAAATTATGCACCACGTATGCTTTTGAAGTTTTCAATGATTATGACA
CCAGTTCTAGCTGGATGTATGTTATTAATGGAATAA

Upstream 100 bases:

>100_bases
AAGTACATAGTATTGAAATAAAAAGTATCCTAGACGGATGCTTTTTATTTGTGTAGAAGAAAGAATATGGTGGATAATTG
CCTTACTGGAGGGAGAGTAT

Downstream 100 bases:

>100_bases
AAATAATATAGCAAACTAATATGTTTTACGAATGAATTATGTAAGTAATTCATATTTCCCATATAAAAGGATTTGTTTTA
ATATAATGAGTGTAAAGTTC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MAIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFG
SYIGSKIGSLIPPYLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAP
FIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMT
PVLAGCMLLME

Sequences:

>Translated_251_residues
MAIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFG
SYIGSKIGSLIPPYLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAP
FIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMT
PVLAGCMLLME
>Mature_250_residues
AIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGS
YIGSKIGSLIPPYLLHWFTAGMLFLSAIFMFIKLIKFQNREELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPF
IQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMTP
VLAGCMLLME

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26623; Mature: 26492

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCC
>Mature Secondary Structure 
AIIITMLVMGILLGFVGAGGAGFIIAILTLVFHIPIHVALATSLTAMAFTTLSGVISHY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REGNVVLTIGGIVGGCGAFGSYIGSKIGSLIPPYLLHWFTAGMLFLSAIFMFIKLIKFQN
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
REELLLAEIKDFSKENIMKCICLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCH
TMLVILPIAIGGGLGYSSEGYLDHILLLQVLIGTMLGAYIGAKFTNYAPRMLLKFSMIMT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLAGCMLLME
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]