| Definition | Bacillus thuringiensis serovar konkukian str. 97-27 chromosome, complete genome. |
|---|---|
| Accession | NC_005957 |
| Length | 5,237,682 |
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The map label for this gene is colA
Identifier: 49478266
GI number: 49478266
Start: 3355888
End: 3358803
Strand: Reverse
Name: colA
Synonym: BT9727_3286
Alternate gene names: 49478266
Gene position: 3358803-3355888 (Counterclockwise)
Preceding gene: 49479287
Following gene: 49478265
Centisome position: 64.13
GC content: 35.32
Gene sequence:
>2916_bases ATGAAAGGCTATTCAAAAAAAGTGTTAGTAGGGGTAAGTTTTGCTAGTTTAATGTTAGGGGGTTTTCAAGGGGGCGCATT GGCAGAAGGTACAAAGGGAGAGCAAGCTTCATATCGGAATGTGCTCAAAATGGAACCAGTTGGTGTACAATTACCAGTAC AAGAATTAGCTCATTCATCAAAAGTACTTGAAAATAAGTCTTTTGAGAAGAGGTTACAATTTGCTGATTTGTCGCAAAGA CCGCCTGAATTGAAAAAGGAGAGTAAGCAATTAGCTACAGCAAAAACTTATACAATTGCTGAGTTAAATCAATTAAGCAA TCAGCAGTTAGTAGATTTACTTGTAACAATTGATTGGGAGCAAATTACTGGGCTATTTCAGTTTAATAAGGATAGTCTTG CATTCTATCAAAATGATAGTAGAATGCAGGCAATTATTGATAAATTGAACCAGCAAGGACAAGCGTATACGAAAGATGAT TCAAAAGGGATTGAGACTTTAGTAGAGGTATTACGATCTGGTTTTTATTTAGGATTTTATCATACAGAATTAAGTAAACT AAATGAGCGAAGCTATCATGATAAATGCTTACCTGCATTAAAAACGATTGCGAATAACCCGAATTTCAAACTAGGTACGT TAGAACAAAATAGAGTTGTATCATCATACGGAAAATTAATAGGAAATGCTTCGAGTGATGTGGAAACGATAACATCAGCT GCAAAGATTTTTAAACAATATAATGATAATTTTTCTACATTGGTAGATAATCTTTCAGCTGGAAATGCGATTTACGATAT TATGCAAGGCGTTGACTACGATATTCAATCGTATTTGTACGATACGAGAAAAGCACCGAAAGATACAGTATGGTATCAAA AAATTGATAGCTATATTAATGAATTAAGTCGTTTTGCTTTAATTGGAACGGTGACAGAGAAGAATGGTTGGCTTATTAAT AATGGTATTTATTATACAGGTAGACTTGGTACGTTCCATAGTACAGGGACGAAAGGGTTGCAAGTTGTAACAGATGCCAT GAAAATGTATCCGTATTTAGGGGAGCAATATTTCGTAGCGGCTGAGCAAATTGCGACGAATTATGGCGGGAAAGATGCAA ATGGAAACGTTGTGAATTTAGATCAAATACGAGAAGATGGTAAGAAGAAATATTTACCGAAAACATATACATTTGACGAT GGGACAATTGTTTTAAAAGCTGGAGATAAAGTGACAGAAGAAAAAGTAAAACGTCTATATTGGGCGGCAAAAGAAGTGAA GGCTCAATTCCATCGTACGGTTGAAAGTGACCAGCCGTTAGAAAAAGGGAATGCTGATGATGTATTAACGATGGTTATTT ATAATAGCCCAGCTGAATATCAATTTAACCGTCAATTGTACGGGTATGAAACGAATAACGGCGGTCTTTATATAGAAGGA ACAGGTACGTTCTTTACTTATGAGCGTACGCCAGAAGAAAGTATTTATAGTTTAGAGGAATTGTTCCGGCACGAGTTCAC ACATTACTTACAAGGTAGATATGAAGTGCCAGGACTTTGGGGACAAGGTAAGATTTATGAGAATGAGAGATTATCTTGGT TTGAAGAAGGCAATGCAGAGTTTTTTGCAGGTGCAACGAGAACAGATAATGTTGTACCGAGAAAGAGCATTATAGGAGGA ATATCTTCAAATCCGGCAGAACGTTATACGGCAGAGAGAACGTTAAATGCAAAGTACGGAACATGGGATTTTTATAATTA TTCCTTCGCTTTACAATCGTACATGTACAATAAGAGATATGATATGTTTGACAAAGTTCATGATCTTATTAGAAAAAATG ATGTAACAGCATATGATGCATATCGCTCTGCATTAAGTAAAGATGCGAATTTAAATAAAGAGTATCAAGACTATATGCAA ATGTTAGTCGACAATCGTGATAAATATAATGTTCCATTAGTATCAGATGATTATTTAGCAACTCACGCACCGAAACCAGT CTCAGATATTGTGGCAGAAATTACGGCAGAAGCGAAATTAAGTAATGTATCAGTTAAGAAAAATAAATCACAGTTCTTTC ATACATTTACACTGCAAGGAACATATACAGGTACGACTGCAAAAGGAGAATATGAAGACTGGAAATCAATTACACAAAAC GTAAATGATACGTTAAAACGTTTAAGTGCAAAAGAATGGACAGGCTATAAAACAGTAACAGCTTATTTCGTAAATTACCG TGTGAATGCATCAGGACAATTTGAATATGACGTTGTATTCCATGGTATTAATACAGAAGAAGGCGCTGTGAATAAAGCAC CAGTTGCGGTTATAAATGGTCCCTATAGTGGGAATGTAAATGAAGCAATTTCGTTTAAAAGCGATGGATCAAAAGATGAA GATGGAAAAATTGTTGCTTATAAATGGGAGTTTGGTGATGGTACTGTAAGCAATGAACAAAATCCAACTCACGTGTATAC AAAAGAAGGAACATATACAGCGAGATTAACAGTAACAGATGATAAAGGGTTAACGAATACTGTTACAACGAATGTAACAG TTCAAAAGAAAGAAGATAACAGTGTAGAAAAAGAACCAAACAATTCATTCCAGACAGCAAATACACTGCAATTCAATCAA GTTTTACGCGCAAGTTTAGGAAATGGTGATACGAGTGATTTCTTTGAAATAAATGTGGAAACGGCGAAAAATCTGCAAAT TAATGTAACGAAGGAAAATAATATCGGAGTAAACTGGGTTCTTTATTCGGAAGCAGATTTAAATAACTATATTACGTATG CCCAGCAAGAGGGGAATAAGTTAGTAGGAAGTTACTACACGTATCCAGGTAAGTATTATTTACATGTGTATCAGTATGGT GGTGGATTTGGGAATTATACGGTAGAAGTGAAGTAG
Upstream 100 bases:
>100_bases CATGTGTGAACGTTACCTTATTTTTTCTCAATACAGTATAAAAAGTAAAAATAGTAAAATAATGGTGCGGTACACTAGAA AATGTAAGGTAGGGGAGAGC
Downstream 100 bases:
>100_bases TAAATGAAAAAGGAAAAGTGTACCCTATCGAATAGACAATTAAAAAGTCAATTCGATAGGGTATTTCTTGTATTGTCCAC TTATTTTATCCCTAGAAACT
Product: collagenase
Products: NA
Alternate protein names: 120 kDa collagenase [H]
Number of amino acids: Translated: 971; Mature: 971
Protein sequence:
>971_residues MKGYSKKVLVGVSFASLMLGGFQGGALAEGTKGEQASYRNVLKMEPVGVQLPVQELAHSSKVLENKSFEKRLQFADLSQR PPELKKESKQLATAKTYTIAELNQLSNQQLVDLLVTIDWEQITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDD SKGIETLVEVLRSGFYLGFYHTELSKLNERSYHDKCLPALKTIANNPNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPKDTVWYQKIDSYINELSRFALIGTVTEKNGWLIN NGIYYTGRLGTFHSTGTKGLQVVTDAMKMYPYLGEQYFVAAEQIATNYGGKDANGNVVNLDQIREDGKKKYLPKTYTFDD GTIVLKAGDKVTEEKVKRLYWAAKEVKAQFHRTVESDQPLEKGNADDVLTMVIYNSPAEYQFNRQLYGYETNNGGLYIEG TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKIYENERLSWFEEGNAEFFAGATRTDNVVPRKSIIGG ISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRYDMFDKVHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQ MLVDNRDKYNVPLVSDDYLATHAPKPVSDIVAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKSITQN VNDTLKRLSAKEWTGYKTVTAYFVNYRVNASGQFEYDVVFHGINTEEGAVNKAPVAVINGPYSGNVNEAISFKSDGSKDE DGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTARLTVTDDKGLTNTVTTNVTVQKKEDNSVEKEPNNSFQTANTLQFNQ VLRASLGNGDTSDFFEINVETAKNLQINVTKENNIGVNWVLYSEADLNNYITYAQQEGNKLVGSYYTYPGKYYLHVYQYG GGFGNYTVEVK
Sequences:
>Translated_971_residues MKGYSKKVLVGVSFASLMLGGFQGGALAEGTKGEQASYRNVLKMEPVGVQLPVQELAHSSKVLENKSFEKRLQFADLSQR PPELKKESKQLATAKTYTIAELNQLSNQQLVDLLVTIDWEQITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDD SKGIETLVEVLRSGFYLGFYHTELSKLNERSYHDKCLPALKTIANNPNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPKDTVWYQKIDSYINELSRFALIGTVTEKNGWLIN NGIYYTGRLGTFHSTGTKGLQVVTDAMKMYPYLGEQYFVAAEQIATNYGGKDANGNVVNLDQIREDGKKKYLPKTYTFDD GTIVLKAGDKVTEEKVKRLYWAAKEVKAQFHRTVESDQPLEKGNADDVLTMVIYNSPAEYQFNRQLYGYETNNGGLYIEG TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKIYENERLSWFEEGNAEFFAGATRTDNVVPRKSIIGG ISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRYDMFDKVHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQ MLVDNRDKYNVPLVSDDYLATHAPKPVSDIVAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKSITQN VNDTLKRLSAKEWTGYKTVTAYFVNYRVNASGQFEYDVVFHGINTEEGAVNKAPVAVINGPYSGNVNEAISFKSDGSKDE DGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTARLTVTDDKGLTNTVTTNVTVQKKEDNSVEKEPNNSFQTANTLQFNQ VLRASLGNGDTSDFFEINVETAKNLQINVTKENNIGVNWVLYSEADLNNYITYAQQEGNKLVGSYYTYPGKYYLHVYQYG GGFGNYTVEVK >Mature_971_residues MKGYSKKVLVGVSFASLMLGGFQGGALAEGTKGEQASYRNVLKMEPVGVQLPVQELAHSSKVLENKSFEKRLQFADLSQR PPELKKESKQLATAKTYTIAELNQLSNQQLVDLLVTIDWEQITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDD SKGIETLVEVLRSGFYLGFYHTELSKLNERSYHDKCLPALKTIANNPNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPKDTVWYQKIDSYINELSRFALIGTVTEKNGWLIN NGIYYTGRLGTFHSTGTKGLQVVTDAMKMYPYLGEQYFVAAEQIATNYGGKDANGNVVNLDQIREDGKKKYLPKTYTFDD GTIVLKAGDKVTEEKVKRLYWAAKEVKAQFHRTVESDQPLEKGNADDVLTMVIYNSPAEYQFNRQLYGYETNNGGLYIEG TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKIYENERLSWFEEGNAEFFAGATRTDNVVPRKSIIGG ISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRYDMFDKVHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQ MLVDNRDKYNVPLVSDDYLATHAPKPVSDIVAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKSITQN VNDTLKRLSAKEWTGYKTVTAYFVNYRVNASGQFEYDVVFHGINTEEGAVNKAPVAVINGPYSGNVNEAISFKSDGSKDE DGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTARLTVTDDKGLTNTVTTNVTVQKKEDNSVEKEPNNSFQTANTLQFNQ VLRASLGNGDTSDFFEINVETAKNLQINVTKENNIGVNWVLYSEADLNNYITYAQQEGNKLVGSYYTYPGKYYLHVYQYG GGFGNYTVEVK
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013510 - InterPro: IPR007280 - InterPro: IPR002169 - InterPro: IPR013661 - InterPro: IPR022409 - InterPro: IPR000601 [H]
Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD; PF04151 PPC [H]
EC number: =3.4.24.3 [H]
Molecular weight: Translated: 109901; Mature: 109901
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGYSKKVLVGVSFASLMLGGFQGGALAEGTKGEQASYRNVLKMEPVGVQLPVQELAHSS CCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCHHHHHHHH KVLENKSFEKRLQFADLSQRPPELKKESKQLATAKTYTIAELNQLSNQQLVDLLVTIDWE HHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEHHHHHHCCCHHEEEEEEEECHH QITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDDSKGIETLVEVLRSGFYLGFY HHCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE HTELSKLNERSYHDKCLPALKTIANNPNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA HHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPKDTVWYQKIDSYIN HHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH ELSRFALIGTVTEKNGWLINNGIYYTGRLGTFHSTGTKGLQVVTDAMKMYPYLGEQYFVA HHHHEEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH AEQIATNYGGKDANGNVVNLDQIREDGKKKYLPKTYTFDDGTIVLKAGDKVTEEKVKRLY HHHHHHCCCCCCCCCCEEEHHHHHHCHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHH WAAKEVKAQFHRTVESDQPLEKGNADDVLTMVIYNSPAEYQFNRQLYGYETNNGGLYIEG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEEEECCCEEEEEE TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKIYENERLSWFEEGNAE CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCCCEEECCCCE FFAGATRTDNVVPRKSIIGGISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRY EEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCH DMFDKVHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQMLVDNRDKYNVPLVSDDYLA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCC THAPKPVSDIVAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKSITQN CCCCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHH VNDTLKRLSAKEWTGYKTVTAYFVNYRVNASGQFEYDVVFHGINTEEGAVNKAPVAVING HHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEC PYSGNVNEAISFKSDGSKDEDGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTARLTVTD CCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEEC DKGLTNTVTTNVTVQKKEDNSVEKEPNNSFQTANTLQFNQVLRASLGNGDTSDFFEINVE CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE TAKNLQINVTKENNIGVNWVLYSEADLNNYITYAQQEGNKLVGSYYTYPGKYYLHVYQYG ECCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEEEEC GGFGNYTVEVK CCCCCEEEEEC >Mature Secondary Structure MKGYSKKVLVGVSFASLMLGGFQGGALAEGTKGEQASYRNVLKMEPVGVQLPVQELAHSS CCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCHHHHHHHH KVLENKSFEKRLQFADLSQRPPELKKESKQLATAKTYTIAELNQLSNQQLVDLLVTIDWE HHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEHHHHHHCCCHHEEEEEEEECHH QITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDDSKGIETLVEVLRSGFYLGFY HHCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE HTELSKLNERSYHDKCLPALKTIANNPNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA HHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPKDTVWYQKIDSYIN HHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH ELSRFALIGTVTEKNGWLINNGIYYTGRLGTFHSTGTKGLQVVTDAMKMYPYLGEQYFVA HHHHEEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH AEQIATNYGGKDANGNVVNLDQIREDGKKKYLPKTYTFDDGTIVLKAGDKVTEEKVKRLY HHHHHHCCCCCCCCCCEEEHHHHHHCHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHH WAAKEVKAQFHRTVESDQPLEKGNADDVLTMVIYNSPAEYQFNRQLYGYETNNGGLYIEG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEEEECCCEEEEEE TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKIYENERLSWFEEGNAE CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCCCEEECCCCE FFAGATRTDNVVPRKSIIGGISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRY EEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCH DMFDKVHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQMLVDNRDKYNVPLVSDDYLA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCC THAPKPVSDIVAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKSITQN CCCCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHH VNDTLKRLSAKEWTGYKTVTAYFVNYRVNASGQFEYDVVFHGINTEEGAVNKAPVAVING HHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEC PYSGNVNEAISFKSDGSKDEDGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTARLTVTD CCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEEC DKGLTNTVTTNVTVQKKEDNSVEKEPNNSFQTANTLQFNQVLRASLGNGDTSDFFEINVE CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE TAKNLQINVTKENNIGVNWVLYSEADLNNYITYAQQEGNKLVGSYYTYPGKYYLHVYQYG ECCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEEEEC GGFGNYTVEVK CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8282691; 11792842 [H]