Click here to switch to the map view.

The map label for this gene is yibD [C]

Identifier: 49478226

GI number: 49478226

Start: 3277206

End: 3277967

Strand: Reverse

Name: yibD [C]

Synonym: BT9727_3205

Alternate gene names: 49478226

Gene position: 3277967-3277206 (Counterclockwise)

Preceding gene: 49478227

Following gene: 49481728

Centisome position: 62.58

GC content: 30.71

Gene sequence:

>762_bases
ATGACTGAAATAAACGAATCTTCAGGAAGCGATTTACAAAAAGATGTGAAGTTTTCTATTATAATCCCTGCACATAATGA
AGAAAAGTACATTAGAAAATGTTTGGATTCAATTGCAAAAGCATCAGTGGCATATAAAGAGCAAACTGAAGTTATAGTTG
TTTTAAATCGTTGCACAGATAAAACAGAGGAAATAGCAAAATCTTATGATTGTATTACATTAAAAAATGAAGATAAAAAC
TTATCTAAAATCCGAAATGCAGGGGCAGAAATAGCTAGTGGAGAAATAATCGTTACTATAGATGCTGATACGATAATGAC
AGAGTCTTTGTTATCTAATGTAGATAAATATTTATCTTCAGGTAAATATATTGGTGGTGGGGTGAATGGGAAGTTAGAAA
GAATGTCTTTTGGAATATTCTTTTCTGCAATGCTAATTATAATTCCCTTACTTTTTAAGTACGGAGCTGTATCTGTAGGG
ATTTTTTGGTGTTATAGAAAAGATTTTATGGCAATTAACGGATTTAATGAAAACATGCTTATGGCAGAAGATGCAGATTT
CGCGAAACGGTTAAAAGAATGGGGAAAACGAAATAATAAGAAATTCGGTACCATTAAAAATGGAATGATAACTTCATGCA
GAAGATTTGATACATATGGAGACTGGGCCTTACTTAAAAATCCAAAAGTAATATTAGCTTATCTAAAAGGAAATGATCAA
AAGTATGCAGATAAGACATATTATGATAATCAAGAAAGATAA

Upstream 100 bases:

>100_bases
TATGTCTATATTGTTTTAAGTACTTTTTTATAATAAAACTTAATCAATTTAAATATATGTTATGTATAACATATATTTAT
CTAAAATAAGGGGGAATATC

Downstream 100 bases:

>100_bases
CGATGGAGAAAAGCGGCAGGAAATAGTGAGAACAGCAGATTTTCTTATACATAATGAGAGCCTAACTTAATTTAATAGAT
ATGATAAGAAAACCATCAAT

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase GT2 Family; Glycosyl Transferase Family 2 Protein; Teichoic Acid Biosynthesis Related Protein; Glycosyl Transferase

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTEINESSGSDLQKDVKFSIIIPAHNEEKYIRKCLDSIAKASVAYKEQTEVIVVLNRCTDKTEEIAKSYDCITLKNEDKN
LSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSSGKYIGGGVNGKLERMSFGIFFSAMLIIIPLLFKYGAVSVG
IFWCYRKDFMAINGFNENMLMAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
KYADKTYYDNQER

Sequences:

>Translated_253_residues
MTEINESSGSDLQKDVKFSIIIPAHNEEKYIRKCLDSIAKASVAYKEQTEVIVVLNRCTDKTEEIAKSYDCITLKNEDKN
LSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSSGKYIGGGVNGKLERMSFGIFFSAMLIIIPLLFKYGAVSVG
IFWCYRKDFMAINGFNENMLMAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
KYADKTYYDNQER
>Mature_252_residues
TEINESSGSDLQKDVKFSIIIPAHNEEKYIRKCLDSIAKASVAYKEQTEVIVVLNRCTDKTEEIAKSYDCITLKNEDKNL
SKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSSGKYIGGGVNGKLERMSFGIFFSAMLIIIPLLFKYGAVSVGI
FWCYRKDFMAINGFNENMLMAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQK
YADKTYYDNQER

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28673; Mature: 28542

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEINESSGSDLQKDVKFSIIIPAHNEEKYIRKCLDSIAKASVAYKEQTEVIVVLNRCTD
CCCCCCCCCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
KTEEIAKSYDCITLKNEDKNLSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSS
HHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHC
GKYIGGGVNGKLERMSFGIFFSAMLIIIPLLFKYGAVSVGIFWCYRKDFMAINGFNENML
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEECCCEEEEECCCCCEE
MAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
EECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCC
KYADKTYYDNQER
CCCCCCCCCCCCC
>Mature Secondary Structure 
TEINESSGSDLQKDVKFSIIIPAHNEEKYIRKCLDSIAKASVAYKEQTEVIVVLNRCTD
CCCCCCCCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
KTEEIAKSYDCITLKNEDKNLSKIRNAGAEIASGEIIVTIDADTIMTESLLSNVDKYLSS
HHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHC
GKYIGGGVNGKLERMSFGIFFSAMLIIIPLLFKYGAVSVGIFWCYRKDFMAINGFNENML
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEECCCEEEEECCCCCEE
MAEDADFAKRLKEWGKRNNKKFGTIKNGMITSCRRFDTYGDWALLKNPKVILAYLKGNDQ
EECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEEEEEECCCC
KYADKTYYDNQER
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA