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The map label for this gene is ykgB [H]

Identifier: 49478201

GI number: 49478201

Start: 3226849

End: 3227916

Strand: Reverse

Name: ykgB [H]

Synonym: BT9727_3160

Alternate gene names: 49478201

Gene position: 3227916-3226849 (Counterclockwise)

Preceding gene: 49481705

Following gene: 49481792

Centisome position: 61.63

GC content: 35.39

Gene sequence:

>1068_bases
ATGAAAATGAAGGATAATAAAGAGTTTATTGGATATGTTGGAACATACACGAAAGAAAATAGTGAAGGAATATATAAGTT
TACGTTAGACACGGAAGCAAAGAAAATTAGTAATGTAACACTTGCGGCCAAGTTGGATAACCCTACATATGTAACGATTA
ATCGAAATAATGAATATCTCTACTCTGTTGTTAAGGAAGGCGAATCTGGTGGTGTAGCTGCTTATTCGATTAATAGTAAA
ACTGGAGAGCTAACAGAAGAAAACAGACAAGTAGTAGAAGGGGCTTCCCCTTGTCATGTGAGTGTTGATAGTAGAAATCA
TACGGTAGTTACAGCAAATTACCATAAAGGAACGATTGAGTCTTTTGTAGTTAATGAAGAAGATGGAACTGTAAGTCCTG
CGGCATCGATTATGGCACATGAAGGTTCAGGTCCGAATAAAGAAAGACAAGAAAAACCACATGCACATTACGCGGGATAT
ACTCCTGATGAAAAATATGTAGTGGGTGTTGATTTAGGGATAGATAAAATAATTACGTATGAAATAAAAGATAGTACATT
AACAGAAGTGAATCGTTTATCTGTAAATCCAGGGAGTGGTCCAAGACATATTACTTTTCATCCAAATGGAAAGTATGCGT
ATGTGATGACGGAGCTGAGTTCAGAAGTTATTGTGTTAACATATAATCCGGCAGAAGGATCATTTACAGAATTACAGTAT
ATTTCTACTGTTCCAGAAGAGTTTGATGAAAATAATCAAGGAAGTGCGATTCATATTTCTTCTGACGGCCGTTTTGTATA
TGCAGGTAATCGTGGTCATAATAGTATTACTGTTTTCAGCGTAGATAAAAATTCAGGCAAGCTTACATTTGTCGAACATA
CATCTACAGAAGGAAATTGGCCAAGAGACTTTGTATTAGATCCTACTGAAAAGTTTCTTGTTGCTACAAATGAAAAATCA
CATAATCTTGTGCTATTTTCAAGAAATGAATCTACAGGTAAGTTAACACTTTTACAATCTGATGTTGCTGTGCCAGAGCC
TGTTTGTGTGAAGTTTTTGAACGTTTAA

Upstream 100 bases:

>100_bases
ATGGTAACGTATAAAGAGGTACTCCAATTTTTTTGGATACTCTTTCAACATAAAATATGTTAAGAAGTATGATGAACGAA
AAATATAGGGAGAGAGGGTT

Downstream 100 bases:

>100_bases
TTTAAGTTTTCATTTCATATAGCAGTGTCGTTATTTGTCGGTAAGTCGATATCCTTTGTCGAAACGTCGATATATTAAAA
TAATCGTTGATATAATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYLYSVVKEGESGGVAAYSINSK
TGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIESFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGY
TPDEKYVVGVDLGIDKIITYEIKDSTLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGSFTELQY
ISTVPEEFDENNQGSAIHISSDGRFVYAGNRGHNSITVFSVDKNSGKLTFVEHTSTEGNWPRDFVLDPTEKFLVATNEKS
HNLVLFSRNESTGKLTLLQSDVAVPEPVCVKFLNV

Sequences:

>Translated_355_residues
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYLYSVVKEGESGGVAAYSINSK
TGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIESFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGY
TPDEKYVVGVDLGIDKIITYEIKDSTLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGSFTELQY
ISTVPEEFDENNQGSAIHISSDGRFVYAGNRGHNSITVFSVDKNSGKLTFVEHTSTEGNWPRDFVLDPTEKFLVATNEKS
HNLVLFSRNESTGKLTLLQSDVAVPEPVCVKFLNV
>Mature_355_residues
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYLYSVVKEGESGGVAAYSINSK
TGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIESFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGY
TPDEKYVVGVDLGIDKIITYEIKDSTLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGSFTELQY
ISTVPEEFDENNQGSAIHISSDGRFVYAGNRGHNSITVFSVDKNSGKLTFVEHTSTEGNWPRDFVLDPTEKFLVATNEKS
HNLVLFSRNESTGKLTLLQSDVAVPEPVCVKFLNV

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=325, Percent_Identity=30.1538461538462, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 39195; Mature: 39195

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYL
CCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCHHHCCEEEEEEECCCEEEEEECCCCEE
YSVVKEGESGGVAAYSINSKTGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIE
EEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCEE
SFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGYTPDEKYVVGVDLGIDKIITY
EEEEECCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
EIKDSTLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGSFTELQY
EECCCCCCEEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEE
ISTVPEEFDENNQGSAIHISSDGRFVYAGNRGHNSITVFSVDKNSGKLTFVEHTSTEGNW
EHHCCHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCCCCC
PRDFVLDPTEKFLVATNEKSHNLVLFSRNESTGKLTLLQSDVAVPEPVCVKFLNV
CCCEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHEEECC
>Mature Secondary Structure
MKMKDNKEFIGYVGTYTKENSEGIYKFTLDTEAKKISNVTLAAKLDNPTYVTINRNNEYL
CCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCHHHCCEEEEEEECCCEEEEEECCCCEE
YSVVKEGESGGVAAYSINSKTGELTEENRQVVEGASPCHVSVDSRNHTVVTANYHKGTIE
EEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCEE
SFVVNEEDGTVSPAASIMAHEGSGPNKERQEKPHAHYAGYTPDEKYVVGVDLGIDKIITY
EEEEECCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
EIKDSTLTEVNRLSVNPGSGPRHITFHPNGKYAYVMTELSSEVIVLTYNPAEGSFTELQY
EECCCCCCEEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEE
ISTVPEEFDENNQGSAIHISSDGRFVYAGNRGHNSITVFSVDKNSGKLTFVEHTSTEGNW
EHHCCHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCCCCC
PRDFVLDPTEKFLVATNEKSHNLVLFSRNESTGKLTLLQSDVAVPEPVCVKFLNV
CCCEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]