Click here to switch to the map view.

The map label for this gene is yeeF [H]

Identifier: 49478143

GI number: 49478143

Start: 3144869

End: 3145561

Strand: Reverse

Name: yeeF [H]

Synonym: BT9727_3071

Alternate gene names: 49478143

Gene position: 3145561-3144869 (Counterclockwise)

Preceding gene: 49478144

Following gene: 49478142

Centisome position: 60.06

GC content: 39.54

Gene sequence:

>693_bases
GTGGACTCCGTATCCCCATTCGTTAAAGGTGTAGAAATACTGCCAGATGGAAGTGTCGTTAGATCTGGAACGAACTATAG
CGGGAAATTCCAAGAAGCCCATGATGCCTCAAAGGCGAGTATTCAGAGTAGGATCTCGAATTTGGAGAGTGGTGGGGTTA
AGGGTACGGGTGAAACTCCTAAGATAACTGAAATAAAAGAGAAAGATCTTGGGAAGCACATTATTAAAGGGAAAAATGGA
AGGAAAGAACTTGCGCCAAACGTGCGTTATATTACTGAGGATGGTTATAAATATACAACAGATGAGCTTGGTAGAATAGT
AGATGTTGAGGCAGGAGAATTAATACTTCAAAAAGGAAAACGAAACACAGGAATGCAAGTGGCTGCAGGAAGAGAAGATA
GATTACCGGATGATGATGGTGGGCATTTGATAGGGACGCAATTCCATGGATCCGGTGATATTGATAATTTAGTCGCTCAA
AATAAACAAATTAATCGTTCGGGTGGAGAATGGTATAACATGGAGAAAGAATGGGCTAATGCATTAGGTGGAAAGCCTCC
TAAAAAAGTGACAGTAAAAATTGAACCAGTATACTTAGGTTCATCGCTAAGACCAAACTCATTTAAAATAAAATACCAAA
TTGAAGGCCAACGTAAGGTAATACGTGAAATACTTAATAAAACAGGAGGTTGA

Upstream 100 bases:

>100_bases
ATTAGATAGGCATGTTATAAATGTTTAAAAATTATTTTTATGAATTAAGGTTAACAAAAATTACTAGTATTATATAATTG
AAAATACATTAGCAAAAGGT

Downstream 100 bases:

>100_bases
TGTAAAAGTGTTCGAATTAGAATTAAATAAAATCTATCAAAATATAACGCAAAAAATAAATGATACAATTCCCGTAGAAT
GGGATATCTTTTATTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDSVSPFVKGVEILPDGSVVRSGTNYSGKFQEAHDASKASIQSRISNLESGGVKGTGETPKITEIKEKDLGKHIIKGKNG
RKELAPNVRYITEDGYKYTTDELGRIVDVEAGELILQKGKRNTGMQVAAGREDRLPDDDGGHLIGTQFHGSGDIDNLVAQ
NKQINRSGGEWYNMEKEWANALGGKPPKKVTVKIEPVYLGSSLRPNSFKIKYQIEGQRKVIREILNKTGG

Sequences:

>Translated_230_residues
MDSVSPFVKGVEILPDGSVVRSGTNYSGKFQEAHDASKASIQSRISNLESGGVKGTGETPKITEIKEKDLGKHIIKGKNG
RKELAPNVRYITEDGYKYTTDELGRIVDVEAGELILQKGKRNTGMQVAAGREDRLPDDDGGHLIGTQFHGSGDIDNLVAQ
NKQINRSGGEWYNMEKEWANALGGKPPKKVTVKIEPVYLGSSLRPNSFKIKYQIEGQRKVIREILNKTGG
>Mature_230_residues
MDSVSPFVKGVEILPDGSVVRSGTNYSGKFQEAHDASKASIQSRISNLESGGVKGTGETPKITEIKEKDLGKHIIKGKNG
RKELAPNVRYITEDGYKYTTDELGRIVDVEAGELILQKGKRNTGMQVAAGREDRLPDDDGGHLIGTQFHGSGDIDNLVAQ
NKQINRSGGEWYNMEKEWANALGGKPPKKVTVKIEPVYLGSSLRPNSFKIKYQIEGQRKVIREILNKTGG

Specific function: Unknown

COG id: COG5444

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0720 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006829 [H]

Pfam domain/function: PF04740 Transposase_30 [H]

EC number: NA

Molecular weight: Translated: 25180; Mature: 25180

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSVSPFVKGVEILPDGSVVRSGTNYSGKFQEAHDASKASIQSRISNLESGGVKGTGETP
CCCCCCHHCCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KITEIKEKDLGKHIIKGKNGRKELAPNVRYITEDGYKYTTDELGRIVDVEAGELILQKGK
CCCHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCEECHHHCCCEEECCCHHHHHHCCC
RNTGMQVAAGREDRLPDDDGGHLIGTQFHGSGDIDNLVAQNKQINRSGGEWYNMEKEWAN
CCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
ALGGKPPKKVTVKIEPVYLGSSLRPNSFKIKYQIEGQRKVIREILNKTGG
HHCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSVSPFVKGVEILPDGSVVRSGTNYSGKFQEAHDASKASIQSRISNLESGGVKGTGETP
CCCCCCHHCCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KITEIKEKDLGKHIIKGKNGRKELAPNVRYITEDGYKYTTDELGRIVDVEAGELILQKGK
CCCHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCEECHHHCCCEEECCCHHHHHHCCC
RNTGMQVAAGREDRLPDDDGGHLIGTQFHGSGDIDNLVAQNKQINRSGGEWYNMEKEWAN
CCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
ALGGKPPKKVTVKIEPVYLGSSLRPNSFKIKYQIEGQRKVIREILNKTGG
HHCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]