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The map label for this gene is yqjV [H]

Identifier: 49478059

GI number: 49478059

Start: 3028865

End: 3030118

Strand: Reverse

Name: yqjV [H]

Synonym: BT9727_2952

Alternate gene names: 49478059

Gene position: 3030118-3028865 (Counterclockwise)

Preceding gene: 49478061

Following gene: 49478058

Centisome position: 57.85

GC content: 33.09

Gene sequence:

>1254_bases
ATGAATTGGAAAGAATTTGAACAAAATATAAAAGTACGCTTAATTACATCATTTTTTAATCGTGCTGTTACATCAGCAGT
AATGCCTTTTATGGCATTGTTTTTTGCTCAAGAAATAAATAAAGTATGGGCTGGTTTATTTTTAATCTTAACGGTTATGT
TAAGTTTTTTTTCAAATTTAATTGGAGGTTACATTTCAGATCGATTTCAACGAAAGCAAATCTTATTGTTAACTTCTTTT
TCTAGTACTTTGATGTTTTTATTCATGACTGTAAGCTTATATCCGACAGATAAGATGATTTGGTTATTTGCAATCGCTTA
TGTAGGTTTTATAATAACTAGCAGTCTTGGGCGTCCATCCATGCAGGCTATCATCATAGACTCAACTACACCGGAAAATC
GAAAGGCTGTCTATACAATTGACTATTGGCTTATGAATCTTTCTATGGCAATTGGTGCAGCATTAGGTGGTTTTTTATAC
ATTAATCATCAACAAGAGCTGTTTATACTACTGACTTGTGTTTCTGCTACAGTACCAATTGCTTATAAAATTTGGCTAGT
TACAGAAGTTAAAGAATGCTTAGAAAAAAGGCAGGAAAATATAGTACTTGATCTAATTCAAAATTATAAAATTGCTATTC
AAGATAGAGCATTTTTAAGAGTTGTAATAGGGTCTACCTGCATATTTGCGGCAGAGTTTTCTTTAAACAGTTATATTGGT
GTACGACTTTCAGAAACATTCAATCCAATAAGCATTGGGGACTTTGAAATAGTAGGAGTGAGGATGCTAAGTATTCTTAA
CATACAAAATATGCTTTTAGTAGTATGTTTAACGTTTATTATAAATAAATTTACTGATCATCTAAGTGGGAAAAAAGCGT
TACTTTTAGGTCTTGTGCTCTATGGGATAGGCTATGTGGCAGTAACATCTTCAAACACTTGGTACGTACTAATTATTTTT
AACTTTATTGCTACTGTTGGTGAACTTGTCTACTCACCAATCAGAAATGCAGAACAAGCTAATATGATTCCGGCTGACAA
GAGAGGATCATATTCAGCTTTTGCGGGTCTATCAGATATTGGGGCAGACCTAATTGCAAGAATGACTATTATCGTCGGTG
CATTCTTAATTCCTACGATGATGTCTGTTTATATTGGTATGATTGTAATAATGGGGGCATTTTTCCTATATAACGGTCTG
TTTGCTAGAACTAGTAGTCAGCCACAGGAGGAATTGGATAAAATTTCAATATAA

Upstream 100 bases:

>100_bases
TCCTATCTCCTTTTATAAGTGGACATGTTTTTCTGAAGGTGTCCATTTTTAATTTGATAAGTCTAGTTTAATATAACATT
GGACAAGGGGAGGAGATACG

Downstream 100 bases:

>100_bases
TACCTAAAATGAAATATACCTAATCTTTTTATAGAATCATAGGATAAGTGTGTAAAGAGGGATTATACAACTTTGGAGGA
ATTATCGAGGAACGAATGTC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNWKEFEQNIKVRLITSFFNRAVTSAVMPFMALFFAQEINKVWAGLFLILTVMLSFFSNLIGGYISDRFQRKQILLLTSF
SSTLMFLFMTVSLYPTDKMIWLFAIAYVGFIITSSLGRPSMQAIIIDSTTPENRKAVYTIDYWLMNLSMAIGAALGGFLY
INHQQELFILLTCVSATVPIAYKIWLVTEVKECLEKRQENIVLDLIQNYKIAIQDRAFLRVVIGSTCIFAAEFSLNSYIG
VRLSETFNPISIGDFEIVGVRMLSILNIQNMLLVVCLTFIINKFTDHLSGKKALLLGLVLYGIGYVAVTSSNTWYVLIIF
NFIATVGELVYSPIRNAEQANMIPADKRGSYSAFAGLSDIGADLIARMTIIVGAFLIPTMMSVYIGMIVIMGAFFLYNGL
FARTSSQPQEELDKISI

Sequences:

>Translated_417_residues
MNWKEFEQNIKVRLITSFFNRAVTSAVMPFMALFFAQEINKVWAGLFLILTVMLSFFSNLIGGYISDRFQRKQILLLTSF
SSTLMFLFMTVSLYPTDKMIWLFAIAYVGFIITSSLGRPSMQAIIIDSTTPENRKAVYTIDYWLMNLSMAIGAALGGFLY
INHQQELFILLTCVSATVPIAYKIWLVTEVKECLEKRQENIVLDLIQNYKIAIQDRAFLRVVIGSTCIFAAEFSLNSYIG
VRLSETFNPISIGDFEIVGVRMLSILNIQNMLLVVCLTFIINKFTDHLSGKKALLLGLVLYGIGYVAVTSSNTWYVLIIF
NFIATVGELVYSPIRNAEQANMIPADKRGSYSAFAGLSDIGADLIARMTIIVGAFLIPTMMSVYIGMIVIMGAFFLYNGL
FARTSSQPQEELDKISI
>Mature_417_residues
MNWKEFEQNIKVRLITSFFNRAVTSAVMPFMALFFAQEINKVWAGLFLILTVMLSFFSNLIGGYISDRFQRKQILLLTSF
SSTLMFLFMTVSLYPTDKMIWLFAIAYVGFIITSSLGRPSMQAIIIDSTTPENRKAVYTIDYWLMNLSMAIGAALGGFLY
INHQQELFILLTCVSATVPIAYKIWLVTEVKECLEKRQENIVLDLIQNYKIAIQDRAFLRVVIGSTCIFAAEFSLNSYIG
VRLSETFNPISIGDFEIVGVRMLSILNIQNMLLVVCLTFIINKFTDHLSGKKALLLGLVLYGIGYVAVTSSNTWYVLIIF
NFIATVGELVYSPIRNAEQANMIPADKRGSYSAFAGLSDIGADLIARMTIIVGAFLIPTMMSVYIGMIVIMGAFFLYNGL
FARTSSQPQEELDKISI

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI1787815, Length=395, Percent_Identity=22.5316455696203, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46867; Mature: 46867

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKEFEQNIKVRLITSFFNRAVTSAVMPFMALFFAQEINKVWAGLFLILTVMLSFFSNL
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGYISDRFQRKQILLLTSFSSTLMFLFMTVSLYPTDKMIWLFAIAYVGFIITSSLGRPS
HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
MQAIIIDSTTPENRKAVYTIDYWLMNLSMAIGAALGGFLYINHQQELFILLTCVSATVPI
EEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCH
AYKIWLVTEVKECLEKRQENIVLDLIQNYKIAIQDRAFLRVVIGSTCIFAAEFSLNSYIG
HHEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCEEEEEEECCCCEEE
VRLSETFNPISIGDFEIVGVRMLSILNIQNMLLVVCLTFIINKFTDHLSGKKALLLGLVL
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YGIGYVAVTSSNTWYVLIIFNFIATVGELVYSPIRNAEQANMIPADKRGSYSAFAGLSDI
HCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHH
GADLIARMTIIVGAFLIPTMMSVYIGMIVIMGAFFLYNGLFARTSSQPQEELDKISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNWKEFEQNIKVRLITSFFNRAVTSAVMPFMALFFAQEINKVWAGLFLILTVMLSFFSNL
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGYISDRFQRKQILLLTSFSSTLMFLFMTVSLYPTDKMIWLFAIAYVGFIITSSLGRPS
HHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
MQAIIIDSTTPENRKAVYTIDYWLMNLSMAIGAALGGFLYINHQQELFILLTCVSATVPI
EEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCH
AYKIWLVTEVKECLEKRQENIVLDLIQNYKIAIQDRAFLRVVIGSTCIFAAEFSLNSYIG
HHEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCEEEEEEECCCCEEE
VRLSETFNPISIGDFEIVGVRMLSILNIQNMLLVVCLTFIINKFTDHLSGKKALLLGLVL
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YGIGYVAVTSSNTWYVLIIFNFIATVGELVYSPIRNAEQANMIPADKRGSYSAFAGLSDI
HCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHH
GADLIARMTIIVGAFLIPTMMSVYIGMIVIMGAFFLYNGLFARTSSQPQEELDKISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]