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The map label for this gene is phaC [H]

Identifier: 49476295

GI number: 49476295

Start: 1897394

End: 1897735

Strand: Reverse

Name: phaC [H]

Synonym: BH16450

Alternate gene names: 49476295

Gene position: 1897735-1897394 (Counterclockwise)

Preceding gene: 49476296

Following gene: 49476294

Centisome position: 98.27

GC content: 40.06

Gene sequence:

>342_bases
ATGGAAATTATTCTTTCTTTAAGCATTGGTGTTCTTGTTGGATCAGGAATTTGGCTTGTTTTGCGTCCACGAACTTTTCA
AGTCATTCTTGGTTTGTCTTTAATTTCTTATGGTGTCAATCTTTTTATGTTTTCAATGAGTAGACCGCGTAGTAACGCTG
CGCCAATTGTTGATCCTGCCACTGTTATTAATCCAGCTAATTATGTCGATCCTCTCCCACAAGCCTTGGTTTTAACTGCG
ATTGTTATTGGTTTTGCAACGACAGCTTTATTTTTGGTTATCCTTCTGGTTTCACGCGGTTTAACGGGTTCAGATCACGT
TGATGGACGTGAGGTGCAGTGA

Upstream 100 bases:

>100_bases
TGTTGGGAGCAACAGTTCTTATTTTGATTGCCCTTGCACACCAGTCAATTCGTAGTTACCGAATCGGTAAGAAACCTCTT
TTGAAAGAGAAGGAAAATTA

Downstream 100 bases:

>100_bases
TGAAAATTGGAGTAAATCATCTCCTTATTTTACCTATTCTTTTGCCATTAATTACTGGAGCACTTCTCCTTTTCTATGAT
GAACGCCGTTCAAAACTTAA

Product: putative monovalent cation/H+ antiporter subunit C

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein C; Pha system subunit C [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEIILSLSIGVLVGSGIWLVLRPRTFQVILGLSLISYGVNLFMFSMSRPRSNAAPIVDPATVINPANYVDPLPQALVLTA
IVIGFATTALFLVILLVSRGLTGSDHVDGREVQ

Sequences:

>Translated_113_residues
MEIILSLSIGVLVGSGIWLVLRPRTFQVILGLSLISYGVNLFMFSMSRPRSNAAPIVDPATVINPANYVDPLPQALVLTA
IVIGFATTALFLVILLVSRGLTGSDHVDGREVQ
>Mature_113_residues
MEIILSLSIGVLVGSGIWLVLRPRTFQVILGLSLISYGVNLFMFSMSRPRSNAAPIVDPATVINPANYVDPLPQALVLTA
IVIGFATTALFLVILLVSRGLTGSDHVDGREVQ

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG1006

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006673
- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: NA

Molecular weight: Translated: 12090; Mature: 12090

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIILSLSIGVLVGSGIWLVLRPRTFQVILGLSLISYGVNLFMFSMSRPRSNAAPIVDPA
CEEEEEEHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCH
TVINPANYVDPLPQALVLTAIVIGFATTALFLVILLVSRGLTGSDHVDGREVQ
HHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIILSLSIGVLVGSGIWLVLRPRTFQVILGLSLISYGVNLFMFSMSRPRSNAAPIVDPA
CEEEEEEHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCH
TVINPANYVDPLPQALVLTAIVIGFATTALFLVILLVSRGLTGSDHVDGREVQ
HHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]