Definition Bartonella henselae str. Houston-1, complete genome.
Accession NC_005956
Length 1,931,047

Click here to switch to the map view.

The map label for this gene is 49476261

Identifier: 49476261

GI number: 49476261

Start: 1856920

End: 1858473

Strand: Reverse

Name: 49476261

Synonym: BH16090

Alternate gene names: NA

Gene position: 1858473-1856920 (Counterclockwise)

Preceding gene: 49476262

Following gene: 49476260

Centisome position: 96.24

GC content: 40.35

Gene sequence:

>1554_bases
ATGATACGTATTTTGATTTATACTTTTGTTGTATGTCTGTTTGGCTTAGCTTTTGAGTGGGTTGCTAATTACAATGATGT
CCTTGTTATAACGTTTTCGCACTTTCGATTTTCCGTTTCATTGTTGACAGCTCTAAGTTTACTCATTTTATTTCTTGGAA
TTTTGGCGCTTTTATGGTGGCTTTTTTCTATACTTTTTTCCGTACCTCACATTCTCTCCAATTATTTTTATAAACGTCGT
CAAAAGCACGGTTATGAAGCTCTTTCACAGGGCTTTCTTGCAGTTTTTGCTGGCGATGCTATTGTAGCGCAAAAAATGCA
GACACGTGTTGAAAAATATCTTGCAGGAAATCGTGAGCCATTGGCTAAGCTTTTACAAGCACAAACTTTATCTTTGCAGA
ATAACTCTGCTCGTGCCATTGGTCTTTATGAGCAAATGAGAAAAGAAAAACAGACAAAACTGGCTGGGCTTTACGGTTTA
TTTCGTGAAGCTATGAAGACCAATGCGTATGAAGCAGCACAACAATATGCACAAGAAGCACAGGCTTTATCACCAGCACT
TTTGTGGGCGCATCAAGCAGTGCTTGATCGCTTGAGCGCAGAGGGGAGCTGGGATAAAGCACTTGATGTTTTTGAACAGG
CGCAAAAAGCTTTACCGCGTTCTGTCCGCTTGGCTCCAGAGCGTCAACATTTACAGGCTTTACTGCTCAGTGGGCAGGCT
CTTCATCTGTTGAGGACGCATCCTGTAGATGCTTGTAAGGCTATTTTGAAAGCACATAAACTCGTGCCTGATTTTATACC
TATAACAGTGATTGCCGCCGATATTCTTTATAAATTAAATGAAACACGCAAAGCTGATAAAATGATTGTTGCTGCTTGGC
AAAAAGAACCTCATCCTGATTTGGGAGCTCTTTATCTTGAAAGAGAAGAAGGGGCCGTTGGGCGCTTAAAAAAAGCTAAG
ACACTTGCTTCTTATAATAAAGATACATTTGAATCCACTTTTCTTATTGCTAAAGCTGCTCTTGATGCAGGTGAAAGAGT
ATTAGCTAGGGAACAGGCACAAAAAGCACTTCAATATCATAAGCGGGAAAGTGTTTATTTGTTGCTAGCAGATATTGAAG
AAGCACAGGGTAATAATCAGGCGGCAGTGCGGCAATGGCTTTCTTTGGCGCTGCGTGCTGAACGTGATCCGGTATGGATG
TGTGACGGTACTATTTTTTCTTCTTGGGCAGTCATCTCTCCAATAAGTGGACGTTTGGGCTGCTTTGAATGGAAAGCACC
TCCCCGTATGCCCCCTCTCACATTGGAGGCTGATACTCTTGTGCTGACAAAAAAAGACCAAGAAGATAAAGAAGATAAGG
TGGATAAAAATGCTGTTGTTGAAGGTGAAATGTTAGAAAAGTCTCCTTCTGTAAAAGTTGATCTTTTGCATCATGCACAG
ATAGATAAACAAGATACAGAAGAATCTAGTCAAATTCGCTTAAATGTTGATGATCCAGGGGTTAAAATAGAAGAAGATGC
GTTTTTGTCGAAAAAGAAATTTCGGTTGTTTTAA

Upstream 100 bases:

>100_bases
AACTTGAAAGATATGTTGCTGTTCATAACCTTCTTCAGCAGTTGTTGTTGTCTGCACAACAAGGATCTTTTAAGGCAACA
AGCATGTAAATAGGCTAAAA

Downstream 100 bases:

>100_bases
AAAAACTATAGTGAATATTCTGTATCGAAATTATTCTCTTATGCTTAAAAAATGAAATTTTACTTAGCTGCAAAAGTGAT
TGGTTGAAACATGTTTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Signal Peptide; Hypthetical Protein Contains N-Terminal HemY Domain; HemY Domain Membrane Protein

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWWLFSILFSVPHILSNYFYKRR
QKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREPLAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGL
FREAMKTNAYEAAQQYAQEAQALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA
LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPDLGALYLEREEGAVGRLKKAK
TLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWM
CDGTIFSSWAVISPISGRLGCFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ
IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF

Sequences:

>Translated_517_residues
MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWWLFSILFSVPHILSNYFYKRR
QKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREPLAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGL
FREAMKTNAYEAAQQYAQEAQALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA
LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPDLGALYLEREEGAVGRLKKAK
TLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWM
CDGTIFSSWAVISPISGRLGCFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ
IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF
>Mature_517_residues
MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWWLFSILFSVPHILSNYFYKRR
QKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREPLAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGL
FREAMKTNAYEAAQQYAQEAQALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA
LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPDLGALYLEREEGAVGRLKKAK
TLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWM
CDGTIFSSWAVISPISGRLGCFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ
IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF

Specific function: Unknown

COG id: COG3898

COG function: function code S; Uncharacterized membrane-bound protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58445; Mature: 58445

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW
CEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEHCCCHHHHHHHHHHHHHHHCCCHHH
LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCH
LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPD
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
LGALYLEREEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYH
CCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMCDGTIFSSWAVISPISGRLG
CCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHCCCCCCCCC
CFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ
EEECCCCCCCCCEEECCCEEEEECCCCCCHHHHCCCCCCCCCHHHCCCCCCEEEEHHHHH
IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF
CCCCCCCCCCEEEEEECCCCCEECCHHHHCCHHCCCC
>Mature Secondary Structure
MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW
CEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEHCCCHHHHHHHHHHHHHHHCCCHHH
LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA
HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCH
LHLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHPD
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
LGALYLEREEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQYH
CCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMCDGTIFSSWAVISPISGRLG
CCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHCCCCCCCCC
CFEWKAPPRMPPLTLEADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDLLHHAQ
EEECCCCCCCCCEEECCCEEEEECCCCCCHHHHCCCCCCCCCHHHCCCCCCEEEEHHHHH
IDKQDTEESSQIRLNVDDPGVKIEEDAFLSKKKFRLF
CCCCCCCCCCEEEEEECCCCCEECCHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA