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The map label for this gene is 49476250

Identifier: 49476250

GI number: 49476250

Start: 1841815

End: 1843521

Strand: Reverse

Name: 49476250

Synonym: BH15980

Alternate gene names: NA

Gene position: 1843521-1841815 (Counterclockwise)

Preceding gene: 49476251

Following gene: 49476249

Centisome position: 95.47

GC content: 42.24

Gene sequence:

>1707_bases
GTGGCGATTGCGGTAAAAGGTCCTCAGATAAAGGCAGCGGACTTTGTCTATAGAGCACATCAATTTATACGGTGTTTATG
GGTTGGACCACTGTTTCGTTGGCGGTTTTCGGGGTTTCGTCCTCATAAAATTTTAGCGCATCCTATTGATTTGCATTTAG
CTGATCCGATGATGGCGCATGAATTTTATCATGGTCGTTTTCCTTTTGCAGGTCATATTGTTCATTCTGGTGCTGTTTCT
CCTTTTTCATTAGTTCCACCAACGCCGGAATGGGAGGTGGCTTTGCATGATTTTCATTGGTTGCGTCATATGGCAGCAGC
GGAGAGTGATTTAGCAGCGGCACATGCACGTGCTCTCTTAGAAGATTGGCTTGATCAATGGGGCAAAAAGGTGAAGGGAC
TTGCTTGGAGTAGTCCGGTTGTGGCACGGCGTTTGATTTCGTGGATTTGTAACTCAAAAATGTTGTTACAAGGGGCAAGT
GAGCGGTTTGAAAAATGCTTTTTACGTGCACTTGGTTTCCAGTTTCGTTATTTGCGTATAACGATTTGTAGTATGGAAAA
CAATGATCAACGTTTACAAGCAGCAGCTGCTTTGACGTTTGCATCTCTTGCTTTGCCTGTTTCAGAGGCAGTGAAAAAAA
AAGCACAATCCTTTCTTATCGAAGAGCTTTCACGTCAGATTTTGGTTGATGGCGGTCATATTTCCCGTAGCCCTGTCATT
TTACTGAATTTGTTATCGGATTTATTGTCTTTGCGTCATCTTTTTGTGCATAGCAATGAAGCGGCACCGCGTATTCTTAT
TGATTCTGTTGAACGTATGTTGCCGGCTTTGCGGTTTTTTATCCATGAAGATCAAACATTGGCCCATTTTAATGGGGTTG
GTCCCCTTGTATCGGAACGCTTATCGACACTTTTAGAGCTTGATGAGACAGAAGGACATCCTTTTAGTTATGCACGTTAT
TCAGGGTTTCAGCGTTTACAAGCTAATCAAACGACAGTGCTTGCGGATACAGGAAAGTTTCCACCACGCTCTGCTGCCGA
GTATGCTGGTTCGGGGTGTTTGTCTTTTGAAATGTCTTCTCAGGGAAATCGCTTTATTATCAATACGGGTGTTCATTCTT
ATGGGCGTGAAGAATATCGGCATTTAGGACGTGTTACCGCGGCACATTCAACAGCGACAGTTAATGATTGTTCGGTGGGT
GTTTTTCATAAAAAAAGAAATGGTGCTACTTTTTTGCTTGAGGGACCAACCGATGTTAAAGTACGCCGTATAGAGGATTC
GGAAAAAACTGGTTTTATTGCTAGCCATAATGGTTATGTGCGACCTTTTAATCTTGTTCATGAACGTGGTCTTATTTTGG
CAAAAAATGGGAAAGTGATCGAGGGTTTTGATCGCTTTTTTATCCCAAAAAAGAGGCTCTCAAAGAAAAATACAGACGCA
CAAAGAGAACAAAATAACGTTGCTGTTCGGTTTCACCTTCATCCGCAAGTGGAAGTCAATTATGATGGTAAATGTGTGCG
TTTAGCTGTAAGCGATGGGCAAGTTTGGTATTTCATATCACCTGATGCTGATATTTGTCTTGAAGATTCGATTGATTTTG
CTGAGCAAACAAGTCCGCAACGCACACAACAGATTGTTTTATATTTTCGTCCTGCATGTCAGGAAAAAGTTCGTTGGCGT
TTTATCCGTCGTTCGTTAGAGCAATGA

Upstream 100 bases:

>100_bases
GGTTTTTTTGCAGCGCGCTTGCGAAAAGTGGCTTAATTAACGGTTCATTTACTAAAATGGCTGAAATTGTGCTTGATTCA
GCACAAATGGAGATAAGATT

Downstream 100 bases:

>100_bases
TTTGCTCCTTTATGTAAGTGAAGAATTGTTCTTTAGTGTGTTTTAAAAAGCCTTTTTTCCTTTTTGTGTATTTTGCTAAA
AGCATGTGCTATAATATATA

Product: hypothetical protein

Products: NA

Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MAIAVKGPQIKAADFVYRAHQFIRCLWVGPLFRWRFSGFRPHKILAHPIDLHLADPMMAHEFYHGRFPFAGHIVHSGAVS
PFSLVPPTPEWEVALHDFHWLRHMAAAESDLAAAHARALLEDWLDQWGKKVKGLAWSSPVVARRLISWICNSKMLLQGAS
ERFEKCFLRALGFQFRYLRITICSMENNDQRLQAAAALTFASLALPVSEAVKKKAQSFLIEELSRQILVDGGHISRSPVI
LLNLLSDLLSLRHLFVHSNEAAPRILIDSVERMLPALRFFIHEDQTLAHFNGVGPLVSERLSTLLELDETEGHPFSYARY
SGFQRLQANQTTVLADTGKFPPRSAAEYAGSGCLSFEMSSQGNRFIINTGVHSYGREEYRHLGRVTAAHSTATVNDCSVG
VFHKKRNGATFLLEGPTDVKVRRIEDSEKTGFIASHNGYVRPFNLVHERGLILAKNGKVIEGFDRFFIPKKRLSKKNTDA
QREQNNVAVRFHLHPQVEVNYDGKCVRLAVSDGQVWYFISPDADICLEDSIDFAEQTSPQRTQQIVLYFRPACQEKVRWR
FIRRSLEQ

Sequences:

>Translated_568_residues
MAIAVKGPQIKAADFVYRAHQFIRCLWVGPLFRWRFSGFRPHKILAHPIDLHLADPMMAHEFYHGRFPFAGHIVHSGAVS
PFSLVPPTPEWEVALHDFHWLRHMAAAESDLAAAHARALLEDWLDQWGKKVKGLAWSSPVVARRLISWICNSKMLLQGAS
ERFEKCFLRALGFQFRYLRITICSMENNDQRLQAAAALTFASLALPVSEAVKKKAQSFLIEELSRQILVDGGHISRSPVI
LLNLLSDLLSLRHLFVHSNEAAPRILIDSVERMLPALRFFIHEDQTLAHFNGVGPLVSERLSTLLELDETEGHPFSYARY
SGFQRLQANQTTVLADTGKFPPRSAAEYAGSGCLSFEMSSQGNRFIINTGVHSYGREEYRHLGRVTAAHSTATVNDCSVG
VFHKKRNGATFLLEGPTDVKVRRIEDSEKTGFIASHNGYVRPFNLVHERGLILAKNGKVIEGFDRFFIPKKRLSKKNTDA
QREQNNVAVRFHLHPQVEVNYDGKCVRLAVSDGQVWYFISPDADICLEDSIDFAEQTSPQRTQQIVLYFRPACQEKVRWR
FIRRSLEQ
>Mature_567_residues
AIAVKGPQIKAADFVYRAHQFIRCLWVGPLFRWRFSGFRPHKILAHPIDLHLADPMMAHEFYHGRFPFAGHIVHSGAVSP
FSLVPPTPEWEVALHDFHWLRHMAAAESDLAAAHARALLEDWLDQWGKKVKGLAWSSPVVARRLISWICNSKMLLQGASE
RFEKCFLRALGFQFRYLRITICSMENNDQRLQAAAALTFASLALPVSEAVKKKAQSFLIEELSRQILVDGGHISRSPVIL
LNLLSDLLSLRHLFVHSNEAAPRILIDSVERMLPALRFFIHEDQTLAHFNGVGPLVSERLSTLLELDETEGHPFSYARYS
GFQRLQANQTTVLADTGKFPPRSAAEYAGSGCLSFEMSSQGNRFIINTGVHSYGREEYRHLGRVTAAHSTATVNDCSVGV
FHKKRNGATFLLEGPTDVKVRRIEDSEKTGFIASHNGYVRPFNLVHERGLILAKNGKVIEGFDRFFIPKKRLSKKNTDAQ
REQNNVAVRFHLHPQVEVNYDGKCVRLAVSDGQVWYFISPDADICLEDSIDFAEQTSPQRTQQIVLYFRPACQEKVRWRF
IRRSLEQ

Specific function: Unknown

COG id: COG5360

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64478; Mature: 64346

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAVKGPQIKAADFVYRAHQFIRCLWVGPLFRWRFSGFRPHKILAHPIDLHLADPMMAH
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCHHHHH
EFYHGRFPFAGHIVHSGAVSPFSLVPPTPEWEVALHDFHWLRHMAAAESDLAAAHARALL
HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EDWLDQWGKKVKGLAWSSPVVARRLISWICNSKMLLQGASERFEKCFLRALGFQFRYLRI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHCCEEEEEEE
TICSMENNDQRLQAAAALTFASLALPVSEAVKKKAQSFLIEELSRQILVDGGHISRSPVI
EEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH
LLNLLSDLLSLRHLFVHSNEAAPRILIDSVERMLPALRFFIHEDQTLAHFNGVGPLVSER
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHH
LSTLLELDETEGHPFSYARYSGFQRLQANQTTVLADTGKFPPRSAAEYAGSGCLSFEMSS
HHHHHHHHCCCCCCCCHHHHHCHHHHCCCCEEEEEECCCCCCCCHHHHCCCCEEEEEECC
QGNRFIINTGVHSYGREEYRHLGRVTAAHSTATVNDCSVGVFHKKRNGATFLLEGPTDVK
CCCEEEEECCCHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEE
VRRIEDSEKTGFIASHNGYVRPFNLVHERGLILAKNGKVIEGFDRFFIPKKRLSKKNTDA
EEEECCCCCCCEEECCCCCCCCHHHHHHCCEEEECCCCEEECCHHHCCCHHHHCCCCCCH
QREQNNVAVRFHLHPQVEVNYDGKCVRLAVSDGQVWYFISPDADICLEDSIDFAEQTSPQ
HHCCCCEEEEEEECCEEEECCCCEEEEEEEECCEEEEEECCCCCEEEECCCCHHHCCCCH
RTQQIVLYFRPACQEKVRWRFIRRSLEQ
HHHEEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIAVKGPQIKAADFVYRAHQFIRCLWVGPLFRWRFSGFRPHKILAHPIDLHLADPMMAH
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCHHHHH
EFYHGRFPFAGHIVHSGAVSPFSLVPPTPEWEVALHDFHWLRHMAAAESDLAAAHARALL
HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EDWLDQWGKKVKGLAWSSPVVARRLISWICNSKMLLQGASERFEKCFLRALGFQFRYLRI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHCCEEEEEEE
TICSMENNDQRLQAAAALTFASLALPVSEAVKKKAQSFLIEELSRQILVDGGHISRSPVI
EEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH
LLNLLSDLLSLRHLFVHSNEAAPRILIDSVERMLPALRFFIHEDQTLAHFNGVGPLVSER
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHH
LSTLLELDETEGHPFSYARYSGFQRLQANQTTVLADTGKFPPRSAAEYAGSGCLSFEMSS
HHHHHHHHCCCCCCCCHHHHHCHHHHCCCCEEEEEECCCCCCCCHHHHCCCCEEEEEECC
QGNRFIINTGVHSYGREEYRHLGRVTAAHSTATVNDCSVGVFHKKRNGATFLLEGPTDVK
CCCEEEEECCCHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEE
VRRIEDSEKTGFIASHNGYVRPFNLVHERGLILAKNGKVIEGFDRFFIPKKRLSKKNTDA
EEEECCCCCCCEEECCCCCCCCHHHHHHCCEEEECCCCEEECCHHHCCCHHHHCCCCCCH
QREQNNVAVRFHLHPQVEVNYDGKCVRLAVSDGQVWYFISPDADICLEDSIDFAEQTSPQ
HHCCCCEEEEEEECCEEEECCCCEEEEEEEECCEEEEEECCCCCEEEECCCCHHHCCCCH
RTQQIVLYFRPACQEKVRWRFIRRSLEQ
HHHEEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA