Click here to switch to the map view.

The map label for this gene is 49476106

Identifier: 49476106

GI number: 49476106

Start: 1652596

End: 1653312

Strand: Reverse

Name: 49476106

Synonym: BH14450

Alternate gene names: NA

Gene position: 1653312-1652596 (Counterclockwise)

Preceding gene: 49476107

Following gene: 49476105

Centisome position: 85.62

GC content: 43.65

Gene sequence:

>717_bases
ATGCCAATTATTATCGATTGTATTCAAGGAACAGAGCAATGGTATCAAGCACGCAATGGCTTGATTACGGCGTCTTTATT
TGAAATGGTGATGGCACAAAAAAAACAGGGGCAAAAAACCTCAAAATATCATGCTGTTATGAGGAAACTCGCGGGAGAAA
GAATCACCGGAAAAACCGTCGAAGAGGCGACAACGCTTTCTATGCGCCGCGGTACAGAATTGGAACCAACTGCACGCAAG
CTGTATGCTACACTCACGCATACCGAACCTCAGTCGGTTGGTTTCGTTCTGGCCGATGATCGCATGAAAGGGTTTTCTCC
CGATGCTTTTATTGGAACAAATGGACTCTTGGAAATTAAAACCAAAAAACCTGAAATCCTGATTCCGTATTTCACACAAA
AAAGTTTTCCTGCAGAGCATAAAGCGCAATGTCAGGGAGGATTATGGATCGCTCAACGCGAATGGATCGATTTGATGCTC
TATTGGCCTGATATGCCGCTTCTGATTAAACGTGCTTATCGTGATGAAGCTTATATTCGTAAACTGGAAAGTGAGATTAA
CCGTTTTAATGAAGCTTTAGAAATGATGGTGCAACAAATTCAGTGTGTCAAAACAGCAGAAGGTGTGAGAATCCAAAATA
CTTCGGAGGAGGGTACAAGTAGGAGGCTTGTGAGGGGAGGATGCTTTGGGGGAAGAGTATCAACGGGATGCGTGTGA

Upstream 100 bases:

>100_bases
GAAATAGCAGATGAGCTTCGAAAGAGGTGCTGCTTTATAGAAAAGGCTTCTTCAAGCCTTTTCAAAAAGTGAAGGTGCTT
TAAATATTAGGGGGAATAAT

Downstream 100 bases:

>100_bases
GGGGGAGAAGGCTTAGGGGGAAGAGTATCAACGGGATGCGTGTGAGGGGGAGGAGGCTTTGAGGGGAGAGTATCAACGGG
ATGCGTGTGAGGGGGAGGAG

Product: phage related protein

Products: NA

Alternate protein names: Exonuclease; Phage-Type Endonuclease; Bacteriophage Exonuclease; Phage Related Protein; Exonuclease Phage-Type; Phage Related Exonuclease; Phage-Like Protein

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MPIIIDCIQGTEQWYQARNGLITASLFEMVMAQKKQGQKTSKYHAVMRKLAGERITGKTVEEATTLSMRRGTELEPTARK
LYATLTHTEPQSVGFVLADDRMKGFSPDAFIGTNGLLEIKTKKPEILIPYFTQKSFPAEHKAQCQGGLWIAQREWIDLML
YWPDMPLLIKRAYRDEAYIRKLESEINRFNEALEMMVQQIQCVKTAEGVRIQNTSEEGTSRRLVRGGCFGGRVSTGCV

Sequences:

>Translated_238_residues
MPIIIDCIQGTEQWYQARNGLITASLFEMVMAQKKQGQKTSKYHAVMRKLAGERITGKTVEEATTLSMRRGTELEPTARK
LYATLTHTEPQSVGFVLADDRMKGFSPDAFIGTNGLLEIKTKKPEILIPYFTQKSFPAEHKAQCQGGLWIAQREWIDLML
YWPDMPLLIKRAYRDEAYIRKLESEINRFNEALEMMVQQIQCVKTAEGVRIQNTSEEGTSRRLVRGGCFGGRVSTGCV
>Mature_237_residues
PIIIDCIQGTEQWYQARNGLITASLFEMVMAQKKQGQKTSKYHAVMRKLAGERITGKTVEEATTLSMRRGTELEPTARKL
YATLTHTEPQSVGFVLADDRMKGFSPDAFIGTNGLLEIKTKKPEILIPYFTQKSFPAEHKAQCQGGLWIAQREWIDLMLY
WPDMPLLIKRAYRDEAYIRKLESEINRFNEALEMMVQQIQCVKTAEGVRIQNTSEEGTSRRLVRGGCFGGRVSTGCV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27031; Mature: 26900

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIIIDCIQGTEQWYQARNGLITASLFEMVMAQKKQGQKTSKYHAVMRKLAGERITGKTV
CCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH
EEATTLSMRRGTELEPTARKLYATLTHTEPQSVGFVLADDRMKGFSPDAFIGTNGLLEIK
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEE
TKKPEILIPYFTQKSFPAEHKAQCQGGLWIAQREWIDLMLYWPDMPLLIKRAYRDEAYIR
ECCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHH
KLESEINRFNEALEMMVQQIQCVKTAEGVRIQNTSEEGTSRRLVRGGCFGGRVSTGCV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PIIIDCIQGTEQWYQARNGLITASLFEMVMAQKKQGQKTSKYHAVMRKLAGERITGKTV
CEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH
EEATTLSMRRGTELEPTARKLYATLTHTEPQSVGFVLADDRMKGFSPDAFIGTNGLLEIK
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEE
TKKPEILIPYFTQKSFPAEHKAQCQGGLWIAQREWIDLMLYWPDMPLLIKRAYRDEAYIR
ECCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHH
KLESEINRFNEALEMMVQQIQCVKTAEGVRIQNTSEEGTSRRLVRGGCFGGRVSTGCV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA