| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
Click here to switch to the map view.
The map label for this gene is 49476070
Identifier: 49476070
GI number: 49476070
Start: 1614966
End: 1616819
Strand: Reverse
Name: 49476070
Synonym: BH14060
Alternate gene names: NA
Gene position: 1616819-1614966 (Counterclockwise)
Preceding gene: 49476071
Following gene: 49476069
Centisome position: 83.73
GC content: 43.69
Gene sequence:
>1854_bases ATGGATGGCTTTTTAATGAATATTTCTAAAGACTCTTTTGATCCATTAGAGACGCTTGAACACCAAGCACTCTTTAAAAA ACTCGTCAGCTGGTATCAGGATGATATTGCACATGTCGAGCAATGGCGAAAAAATGCCCAAGAAGACTACGATTTTTATA ATGGACGTCAATGGAATGAGCAAGATCTTGCCGTGTTGCGCGAACAAAACAGACCGGTCATGACTTTTAATCGCATTGCT CCTTTGGTCAATGCTGTGATTGGCACAGAGCGCAATAATAAACGACAAGTGCAATTTATTCCACGCCAAGAAGGGGCTGC CTTTGCCAACCAGATTCTCACCGGAGCAGCCGAATGGTTTCGTGATGAAGCTGATGGGGAGTACGAAGATTCTGATGCCT TTCAAGATGCTATCATTTGCGGAATGGGGTGGACCGATACCAGGCTTGATTATGAAGAAGATCCGCAAGGAAAACCCGTC ATTGCAAGATTGGATCCAATGAAAATGGTCTGGGATGCAAGTGCCGTGAAGCCTAATCTGGTTGATGCGCAGCGCTTATG GTATATTGATGAAAAACCCTTAGCAATGGCTCAGGAAATGTTTCCTCATGTCCATTGGAGTGATCTTAATGCCGATTGGG TCAAACATCAGACGTTTTTTCATCAAACCAGCGCTGATAATATGCAAAGCTATCAGAAAGATGTGGAGGAGGAGAGCAGT TCTCAACGTCCTAAAATGGTTACATTGGCTGAATGCCGCTGGTTCGAACGTGAAGTTGTTTATAAGATCCTCGATCCTTT AAGTGGAAAATTTATCGATTATTCAGAGCAAGATTTTCAAAATTTGTGCAAAGATTTTCCTGCAATCCAAGCGACAAGAT TAACGAGAAAAATTGTCAAACGTGCTTTTTTGGGTCGAAAATTGCTCGAAGCACCAGATAAGCCTCTGGTGCCAGCAGGT CAATTGGGATGGGAATGTATTACTGGCACTTTTGATAAGTTGAGCCGGCAATTTTATGGGATTGTCAAACCAACAAAAGA TCCGCAACGCTGGGCAAATAAATATTTTAGTCAAGTGATGCATTTGCTTAATAGTCAGTCAAAAGGCGGAATTATGGCTG AACGCGATGCTTTTGATGATGATCGACAAGCCGTGGAAAGTTGGGCGAGAGCCGATAGCATTACTTGGCTGAAAAGTGGG GCTGTTTCTGGGGGAAGAATCCAGCCTAAGCCCGTTGCACAATTCCCCCAAGGCTTCTTTCAGCTGTTTAATGAAGCAAA GAGCGCACTCGAACAAGTGACCGGATTGTCTTCTGAATTTATTGGTACACGGGCGGTCAATCAACCAGGAATTCTTGAAC AACAACGCCGCCAATCTTCACTCAATTTGTTGGCTTCTTTCTTTGATGGTTTGCGGCGATATCGGCAGCGACAGGGAAAA ATTATTCTCTACCTTATTCAAAACTATCTTTCCGATGGGCGATTGGTGCGTATTGCTGGTGACGAAAATGCTAGGTATGT GCCGTTAACACGCGAAATGATTACCAGTTTGGAGTATGATATTGTGGTTGATGATGCTCCAACGAGTCTCAATGAAAAAG AGCGGACATTTGCTATTATTATGCAATTGCTGCCTTTGATGCAGAGTTTCACAACGCCAGATATTATGCTCGATCTTTTG CGTTATTCACCTTTGCCTGCATCACTCATCCATAAAATTGCACTCAAAGCACAAAAGCAGAGTTTAGAGAAACAAAGTGC TCCATTGCAAGACAGTGCTGAGGCTTTAGGAGGCCCTAGCGGTCATGCCGGTGTGGAACAGCTGATGCCAATCCATTTTG CAGAAGGCACATGA
Upstream 100 bases:
>100_bases ATGGCGCGGATGCCTTTGGACTGATGTGTGTGGCTTATGAACAGCCAAACATGCGGCCGAAAAAAAATACTTATCGTTCT TCTCACCATTCTCAAACTTC
Downstream 100 bases:
>100_bases AAAGTGAAATGGCTTTGTGTTTAGGAAGTGCGGTTTTTTATGCATAGCATCTTTGTCTGCATCACTCATCCATAAAATTG CACTCAAAGCGCAAAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MDGFLMNISKDSFDPLETLEHQALFKKLVSWYQDDIAHVEQWRKNAQEDYDFYNGRQWNEQDLAVLREQNRPVMTFNRIA PLVNAVIGTERNNKRQVQFIPRQEGAAFANQILTGAAEWFRDEADGEYEDSDAFQDAIICGMGWTDTRLDYEEDPQGKPV IARLDPMKMVWDASAVKPNLVDAQRLWYIDEKPLAMAQEMFPHVHWSDLNADWVKHQTFFHQTSADNMQSYQKDVEEESS SQRPKMVTLAECRWFEREVVYKILDPLSGKFIDYSEQDFQNLCKDFPAIQATRLTRKIVKRAFLGRKLLEAPDKPLVPAG QLGWECITGTFDKLSRQFYGIVKPTKDPQRWANKYFSQVMHLLNSQSKGGIMAERDAFDDDRQAVESWARADSITWLKSG AVSGGRIQPKPVAQFPQGFFQLFNEAKSALEQVTGLSSEFIGTRAVNQPGILEQQRRQSSLNLLASFFDGLRRYRQRQGK IILYLIQNYLSDGRLVRIAGDENARYVPLTREMITSLEYDIVVDDAPTSLNEKERTFAIIMQLLPLMQSFTTPDIMLDLL RYSPLPASLIHKIALKAQKQSLEKQSAPLQDSAEALGGPSGHAGVEQLMPIHFAEGT
Sequences:
>Translated_617_residues MDGFLMNISKDSFDPLETLEHQALFKKLVSWYQDDIAHVEQWRKNAQEDYDFYNGRQWNEQDLAVLREQNRPVMTFNRIA PLVNAVIGTERNNKRQVQFIPRQEGAAFANQILTGAAEWFRDEADGEYEDSDAFQDAIICGMGWTDTRLDYEEDPQGKPV IARLDPMKMVWDASAVKPNLVDAQRLWYIDEKPLAMAQEMFPHVHWSDLNADWVKHQTFFHQTSADNMQSYQKDVEEESS SQRPKMVTLAECRWFEREVVYKILDPLSGKFIDYSEQDFQNLCKDFPAIQATRLTRKIVKRAFLGRKLLEAPDKPLVPAG QLGWECITGTFDKLSRQFYGIVKPTKDPQRWANKYFSQVMHLLNSQSKGGIMAERDAFDDDRQAVESWARADSITWLKSG AVSGGRIQPKPVAQFPQGFFQLFNEAKSALEQVTGLSSEFIGTRAVNQPGILEQQRRQSSLNLLASFFDGLRRYRQRQGK IILYLIQNYLSDGRLVRIAGDENARYVPLTREMITSLEYDIVVDDAPTSLNEKERTFAIIMQLLPLMQSFTTPDIMLDLL RYSPLPASLIHKIALKAQKQSLEKQSAPLQDSAEALGGPSGHAGVEQLMPIHFAEGT >Mature_617_residues MDGFLMNISKDSFDPLETLEHQALFKKLVSWYQDDIAHVEQWRKNAQEDYDFYNGRQWNEQDLAVLREQNRPVMTFNRIA PLVNAVIGTERNNKRQVQFIPRQEGAAFANQILTGAAEWFRDEADGEYEDSDAFQDAIICGMGWTDTRLDYEEDPQGKPV IARLDPMKMVWDASAVKPNLVDAQRLWYIDEKPLAMAQEMFPHVHWSDLNADWVKHQTFFHQTSADNMQSYQKDVEEESS SQRPKMVTLAECRWFEREVVYKILDPLSGKFIDYSEQDFQNLCKDFPAIQATRLTRKIVKRAFLGRKLLEAPDKPLVPAG QLGWECITGTFDKLSRQFYGIVKPTKDPQRWANKYFSQVMHLLNSQSKGGIMAERDAFDDDRQAVESWARADSITWLKSG AVSGGRIQPKPVAQFPQGFFQLFNEAKSALEQVTGLSSEFIGTRAVNQPGILEQQRRQSSLNLLASFFDGLRRYRQRQGK IILYLIQNYLSDGRLVRIAGDENARYVPLTREMITSLEYDIVVDDAPTSLNEKERTFAIIMQLLPLMQSFTTPDIMLDLL RYSPLPASLIHKIALKAQKQSLEKQSAPLQDSAEALGGPSGHAGVEQLMPIHFAEGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70641; Mature: 70641
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGFLMNISKDSFDPLETLEHQALFKKLVSWYQDDIAHVEQWRKNAQEDYDFYNGRQWNE CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCH QDLAVLREQNRPVMTFNRIAPLVNAVIGTERNNKRQVQFIPRQEGAAFANQILTGAAEWF HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH RDEADGEYEDSDAFQDAIICGMGWTDTRLDYEEDPQGKPVIARLDPMKMVWDASAVKPNL HCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCC VDAQRLWYIDEKPLAMAQEMFPHVHWSDLNADWVKHQTFFHQTSADNMQSYQKDVEEESS CCHHHHEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SQRPKMVTLAECRWFEREVVYKILDPLSGKFIDYSEQDFQNLCKDFPAIQATRLTRKIVK CCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH RAFLGRKLLEAPDKPLVPAGQLGWECITGTFDKLSRQFYGIVKPTKDPQRWANKYFSQVM HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH HLLNSQSKGGIMAERDAFDDDRQAVESWARADSITWLKSGAVSGGRIQPKPVAQFPQGFF HHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHH QLFNEAKSALEQVTGLSSEFIGTRAVNQPGILEQQRRQSSLNLLASFFDGLRRYRQRQGK HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IILYLIQNYLSDGRLVRIAGDENARYVPLTREMITSLEYDIVVDDAPTSLNEKERTFAII EEEEHHHHHHCCCCEEEEECCCCCEECCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH MQLLPLMQSFTTPDIMLDLLRYSPLPASLIHKIALKAQKQSLEKQSAPLQDSAEALGGPS HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC GHAGVEQLMPIHFAEGT CCCCHHHHCCCCCCCCC >Mature Secondary Structure MDGFLMNISKDSFDPLETLEHQALFKKLVSWYQDDIAHVEQWRKNAQEDYDFYNGRQWNE CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCH QDLAVLREQNRPVMTFNRIAPLVNAVIGTERNNKRQVQFIPRQEGAAFANQILTGAAEWF HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH RDEADGEYEDSDAFQDAIICGMGWTDTRLDYEEDPQGKPVIARLDPMKMVWDASAVKPNL HCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCC VDAQRLWYIDEKPLAMAQEMFPHVHWSDLNADWVKHQTFFHQTSADNMQSYQKDVEEESS CCHHHHEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SQRPKMVTLAECRWFEREVVYKILDPLSGKFIDYSEQDFQNLCKDFPAIQATRLTRKIVK CCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH RAFLGRKLLEAPDKPLVPAGQLGWECITGTFDKLSRQFYGIVKPTKDPQRWANKYFSQVM HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH HLLNSQSKGGIMAERDAFDDDRQAVESWARADSITWLKSGAVSGGRIQPKPVAQFPQGFF HHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHH QLFNEAKSALEQVTGLSSEFIGTRAVNQPGILEQQRRQSSLNLLASFFDGLRRYRQRQGK HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IILYLIQNYLSDGRLVRIAGDENARYVPLTREMITSLEYDIVVDDAPTSLNEKERTFAII EEEEHHHHHHCCCCEEEEECCCCCEECCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH MQLLPLMQSFTTPDIMLDLLRYSPLPASLIHKIALKAQKQSLEKQSAPLQDSAEALGGPS HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC GHAGVEQLMPIHFAEGT CCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA