| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476065
Identifier: 49476065
GI number: 49476065
Start: 1611092
End: 1612210
Strand: Reverse
Name: 49476065
Synonym: BH14010
Alternate gene names: NA
Gene position: 1612210-1611092 (Counterclockwise)
Preceding gene: 49476066
Following gene: 49476064
Centisome position: 83.49
GC content: 43.97
Gene sequence:
>1119_bases ATGACTGTAACTTATATCGGACTTAATGACCCAATGGCAGTGCGCACATGGTCTAAACTCTTGAACCAGGAAGTCTCAAA AGCAATCCCTATTGCACCGTTGATTGGGAATGATTCAAATAGTATTGTACAATTAAAAGATGAAACCACCAAAGCAAGTG GTGATGCCATTAGCTTTAATTTACGTGTACAGCTGTTTGGTGATGGGGTGAGTGAAGGACAGGCGCTTGAAGGTAATGAA GAAGCTCTCCAATTCCTTAATGATCGCTTGGCAATTAATGAACTTGTTCATGCGGTGCGTGTCAAAAATGAAGGAACCAT TGATCAGCAACGTATTTTGCACGATTTGCGTACCGAAGCCAAAAATGGTTTGGTCGATTGGTATGCTGATCGCTTGAGTT TGATGTTCTTTATTCAAGTTTGCGGCTATACCGCAAAAACCATTAACTTCGAAGGTCGTACTCTTACTCTTAAACCTGTC CATTACGGGTTTAATGCACCAACTGCACCAACCGATAAACGCATTGTGCGTCCTAATGGAAAAACAAAAGATGAAGATTT AAAACAAACCGATGTCTTTGATCTCAACCTGATCGATCAAGCTGTTGAACGGGCTAAGCTGGCAAATCCTAAAATTAGAC CCGTACGCATTGATGGCGAAAGTGTTTATGTGCTGTATCTACACCCAACGCAGGTCACACAATTGCGAACCAATACAGAT GCTGGACAGTGGCTCGATATTACCAAGGCAATCTATAGTGGAAGCCGTCTTAAAAATCCACTCTATGATGGATCGCTTGG AATGTATAATGGCGTCGTCTTGCGTGAGGCTGAACATGTTACCGAAGGTGTCGAGTCCGGTGCAACAAACAAAGCTGTGC CAAATGTGCGGCGTGCTGTGCTGCTGGGGGCGCAAAGTGCTGTCATCGCTTTTGGAAAAGATCGCGGTGCTACACGCTAT AAATTGGTGGAAGAGCTGTTCGACTATGAACGAGAGTTCGGTGTTGCAGCAAAAACTATTATCGGTATGAAAAAGACTTG CTTCACCTTGCCAGGAAGTAAACAAGGGGCACAAGATTTTGGTACCATCGTGATCCCAACTTATGGAGCACCCGCTTAA
Upstream 100 bases:
>100_bases CACTTAATAACAAATTCACTCTCTGAAAAGGAAAAATGTGGAGTGTTAACAACCGGCGCTTTGCCGGGTTTTTTATGTCA ATAAACTTTTAGAGGATAAA
Downstream 100 bases:
>100_bases AGGGTGTGTGAAGGCTCCTTCCCAACAGAATATCTTGTTGGGAGAGCGGATCCAAGCCATTGGTTTTAACAGCTTGTCAA AGAACAACCAAGGAGCCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTVTYIGLNDPMAVRTWSKLLNQEVSKAIPIAPLIGNDSNSIVQLKDETTKASGDAISFNLRVQLFGDGVSEGQALEGNE EALQFLNDRLAINELVHAVRVKNEGTIDQQRILHDLRTEAKNGLVDWYADRLSLMFFIQVCGYTAKTINFEGRTLTLKPV HYGFNAPTAPTDKRIVRPNGKTKDEDLKQTDVFDLNLIDQAVERAKLANPKIRPVRIDGESVYVLYLHPTQVTQLRTNTD AGQWLDITKAIYSGSRLKNPLYDGSLGMYNGVVLREAEHVTEGVESGATNKAVPNVRRAVLLGAQSAVIAFGKDRGATRY KLVEELFDYEREFGVAAKTIIGMKKTCFTLPGSKQGAQDFGTIVIPTYGAPA
Sequences:
>Translated_372_residues MTVTYIGLNDPMAVRTWSKLLNQEVSKAIPIAPLIGNDSNSIVQLKDETTKASGDAISFNLRVQLFGDGVSEGQALEGNE EALQFLNDRLAINELVHAVRVKNEGTIDQQRILHDLRTEAKNGLVDWYADRLSLMFFIQVCGYTAKTINFEGRTLTLKPV HYGFNAPTAPTDKRIVRPNGKTKDEDLKQTDVFDLNLIDQAVERAKLANPKIRPVRIDGESVYVLYLHPTQVTQLRTNTD AGQWLDITKAIYSGSRLKNPLYDGSLGMYNGVVLREAEHVTEGVESGATNKAVPNVRRAVLLGAQSAVIAFGKDRGATRY KLVEELFDYEREFGVAAKTIIGMKKTCFTLPGSKQGAQDFGTIVIPTYGAPA >Mature_371_residues TVTYIGLNDPMAVRTWSKLLNQEVSKAIPIAPLIGNDSNSIVQLKDETTKASGDAISFNLRVQLFGDGVSEGQALEGNEE ALQFLNDRLAINELVHAVRVKNEGTIDQQRILHDLRTEAKNGLVDWYADRLSLMFFIQVCGYTAKTINFEGRTLTLKPVH YGFNAPTAPTDKRIVRPNGKTKDEDLKQTDVFDLNLIDQAVERAKLANPKIRPVRIDGESVYVLYLHPTQVTQLRTNTDA GQWLDITKAIYSGSRLKNPLYDGSLGMYNGVVLREAEHVTEGVESGATNKAVPNVRRAVLLGAQSAVIAFGKDRGATRYK LVEELFDYEREFGVAAKTIIGMKKTCFTLPGSKQGAQDFGTIVIPTYGAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41032; Mature: 40901
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTYIGLNDPMAVRTWSKLLNQEVSKAIPIAPLIGNDSNSIVQLKDETTKASGDAISFN CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCEEEEE LRVQLFGDGVSEGQALEGNEEALQFLNDRLAINELVHAVRVKNEGTIDQQRILHDLRTEA EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KNGLVDWYADRLSLMFFIQVCGYTAKTINFEGRTLTLKPVHYGFNAPTAPTDKRIVRPNG HCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEECCCC KTKDEDLKQTDVFDLNLIDQAVERAKLANPKIRPVRIDGESVYVLYLHPTQVTQLRTNTD CCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCEEEEEECCCC AGQWLDITKAIYSGSRLKNPLYDGSLGMYNGVVLREAEHVTEGVESGATNKAVPNVRRAV CCHHHHHHHHHHCCCHHCCCCCCCCCCHHCCEEEECHHHHHHHHHCCCCCCCCCHHHHHH LLGAQSAVIAFGKDRGATRYKLVEELFDYEREFGVAAKTIIGMKKTCFTLPGSKQGAQDF HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCHHHEEECCCCCCCCHHC GTIVIPTYGAPA CEEEEECCCCCC >Mature Secondary Structure TVTYIGLNDPMAVRTWSKLLNQEVSKAIPIAPLIGNDSNSIVQLKDETTKASGDAISFN EEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCEEEEE LRVQLFGDGVSEGQALEGNEEALQFLNDRLAINELVHAVRVKNEGTIDQQRILHDLRTEA EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KNGLVDWYADRLSLMFFIQVCGYTAKTINFEGRTLTLKPVHYGFNAPTAPTDKRIVRPNG HCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEECCCC KTKDEDLKQTDVFDLNLIDQAVERAKLANPKIRPVRIDGESVYVLYLHPTQVTQLRTNTD CCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCEEEEEECCCC AGQWLDITKAIYSGSRLKNPLYDGSLGMYNGVVLREAEHVTEGVESGATNKAVPNVRRAV CCHHHHHHHHHHCCCHHCCCCCCCCCCHHCCEEEECHHHHHHHHHCCCCCCCCCHHHHHH LLGAQSAVIAFGKDRGATRYKLVEELFDYEREFGVAAKTIIGMKKTCFTLPGSKQGAQDF HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCHHHEEECCCCCCCCHHC GTIVIPTYGAPA CEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA