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The map label for this gene is pyrF [H]

Identifier: 49476043

GI number: 49476043

Start: 1564701

End: 1565546

Strand: Reverse

Name: pyrF [H]

Synonym: BH13640

Alternate gene names: 49476043

Gene position: 1565546-1564701 (Counterclockwise)

Preceding gene: 49476048

Following gene: 49476042

Centisome position: 81.07

GC content: 39.6

Gene sequence:

>846_bases
ATGTTTCATTCAACTTTTTTTAAAAATCGTAAAATCTACGGACCGCTTTGTATCGGTTTTGACCCTAGTCATAAAGTTTT
ACAATCATGGAATTTGAGCTGTGATTATAAAGGTCTCAAAGACTTTTGTGATATCCTGTTAACAGCGGTTGTGGGCAATG
TGGGCATTATTAAACCGCAAGTCGCATTTTTTGAATTGTATGGTGTGGAAGGTCTTCAAGTTCTCAAAGAGCTTATTGAA
AATGCACAGGAACAAGGTTTATTGGTAATCGCTGATGCAAAAAGGGGGGATATTGGGTCTACTGTTGAAGCTTATGGTCA
AGCTTGGCTTGGTTCAAGCAGTGCGTTCAAAGCGGATGCGATAACTGCGAATGCTTTTCTTGGTTTTGATGCTCTTATCC
CTTTGATAAAAATTGCAGAAGAAACAGGAACAGCAGTTTTTGTGGTTGTTCAATCCTCGAATCCGGAGGGAAAGCAAATG
CGCAATGCGCTTATTGGTGATCAAACACTTTCTGTTCATTTGGCACAGCGTATTTGTGACTATAATAGCCAGTCTTTGGA
AAAGAATTATTCTATTGGTCCCATTGGTGCGGTTGTTGGAGGAACACTCGGCAGTGAAGCAAAAGATACAATCAAACAGT
TAAAAAATTGCTTGTTTCTTGTACCGGGTATTGGTGCTCAGGGAGGAACAATAACACAACTGACAAACCAGTTCCCTCAA
AGTTTATGGCAGAATATTATTCCTTCTATTTCAAGGTCGATTACAGACGCTGGTTCCAATATTGTTGATTTAAAAACGCG
CATCAATGACTTTGCTATGTGCGCTAAAAACGCGCTTATGTCTTGA

Upstream 100 bases:

>100_bases
TTTTCTTTTTTATGAAAACCATGTTACCGGTCATTTTGATAAATGTATTTCTTTTTGGTTGTATTAGAAAGTTTAAAAAG
ACGCTTTATGAGGGTGTGGA

Downstream 100 bases:

>100_bases
GGACTTTTGTATAGGCACTCAATTGGCGAAGCTCTTAAGAGGAAGTTTTTATAAGAGTGCTTCTTTCAAAGAGTTAGCTT
CGGCTTAGCCAAAATCAATC

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MFHSTFFKNRKIYGPLCIGFDPSHKVLQSWNLSCDYKGLKDFCDILLTAVVGNVGIIKPQVAFFELYGVEGLQVLKELIE
NAQEQGLLVIADAKRGDIGSTVEAYGQAWLGSSSAFKADAITANAFLGFDALIPLIKIAEETGTAVFVVVQSSNPEGKQM
RNALIGDQTLSVHLAQRICDYNSQSLEKNYSIGPIGAVVGGTLGSEAKDTIKQLKNCLFLVPGIGAQGGTITQLTNQFPQ
SLWQNIIPSISRSITDAGSNIVDLKTRINDFAMCAKNALMS

Sequences:

>Translated_281_residues
MFHSTFFKNRKIYGPLCIGFDPSHKVLQSWNLSCDYKGLKDFCDILLTAVVGNVGIIKPQVAFFELYGVEGLQVLKELIE
NAQEQGLLVIADAKRGDIGSTVEAYGQAWLGSSSAFKADAITANAFLGFDALIPLIKIAEETGTAVFVVVQSSNPEGKQM
RNALIGDQTLSVHLAQRICDYNSQSLEKNYSIGPIGAVVGGTLGSEAKDTIKQLKNCLFLVPGIGAQGGTITQLTNQFPQ
SLWQNIIPSISRSITDAGSNIVDLKTRINDFAMCAKNALMS
>Mature_281_residues
MFHSTFFKNRKIYGPLCIGFDPSHKVLQSWNLSCDYKGLKDFCDILLTAVVGNVGIIKPQVAFFELYGVEGLQVLKELIE
NAQEQGLLVIADAKRGDIGSTVEAYGQAWLGSSSAFKADAITANAFLGFDALIPLIKIAEETGTAVFVVVQSSNPEGKQM
RNALIGDQTLSVHLAQRICDYNSQSLEKNYSIGPIGAVVGGTLGSEAKDTIKQLKNCLFLVPGIGAQGGTITQLTNQFPQ
SLWQNIIPSISRSITDAGSNIVDLKTRINDFAMCAKNALMS

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 30298; Mature: 30298

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHSTFFKNRKIYGPLCIGFDPSHKVLQSWNLSCDYKGLKDFCDILLTAVVGNVGIIKPQ
CCCCHHHCCCCEECCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
VAFFELYGVEGLQVLKELIENAQEQGLLVIADAKRGDIGSTVEAYGQAWLGSSSAFKADA
HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHH
ITANAFLGFDALIPLIKIAEETGTAVFVVVQSSNPEGKQMRNALIGDQTLSVHLAQRICD
EEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHC
YNSQSLEKNYSIGPIGAVVGGTLGSEAKDTIKQLKNCLFLVPGIGAQGGTITQLTNQFPQ
CCCHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH
SLWQNIIPSISRSITDAGSNIVDLKTRINDFAMCAKNALMS
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFHSTFFKNRKIYGPLCIGFDPSHKVLQSWNLSCDYKGLKDFCDILLTAVVGNVGIIKPQ
CCCCHHHCCCCEECCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
VAFFELYGVEGLQVLKELIENAQEQGLLVIADAKRGDIGSTVEAYGQAWLGSSSAFKADA
HHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHH
ITANAFLGFDALIPLIKIAEETGTAVFVVVQSSNPEGKQMRNALIGDQTLSVHLAQRICD
EEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHC
YNSQSLEKNYSIGPIGAVVGGTLGSEAKDTIKQLKNCLFLVPGIGAQGGTITQLTNQFPQ
CCCHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH
SLWQNIIPSISRSITDAGSNIVDLKTRINDFAMCAKNALMS
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]