Click here to switch to the map view.

The map label for this gene is nagD [C]

Identifier: 49476008

GI number: 49476008

Start: 1507170

End: 1508015

Strand: Reverse

Name: nagD [C]

Synonym: BH13230

Alternate gene names: 49476008

Gene position: 1508015-1507170 (Counterclockwise)

Preceding gene: 49476009

Following gene: 49476007

Centisome position: 78.09

GC content: 42.43

Gene sequence:

>846_bases
ATGAATGAACTGACCCATATTGATACTGTTATAGAGGATTATGATGCTGTTTTTTGCGATGTGTGGGGTGTGGTGCATAA
CGGTGTACATGCATTTGAACCGGCTTTGAAAGTATTACACAAAATTCGAAAGATGGGAAAAAATGTCATTTTTTTGACCA
ATTCACCTCGTCCACGTGAAAATATCGTTGATCAATTACAAAGTATGAATGTACATAGCGATTGTTATGATGCCATTATC
ACTTCAGGGGATGTGACGCGTGATCTCATTCGGGCTGCACCGCGTAGAGTTTTTTTTATTGGTCAGCAACGTGATTTAGT
TTTGTTTGAAGGGTTGGATTGTGAATTGGTTGAAGAGTGGGAGGCCTCGGTGGTGGTTTGCAGTGGCTTTCTTGAAGGTT
TTGAGGAAAAACCTTCCGCTTATGAGGATATGTTTCACCGTATGCGAGCGCGGAATTTACCATTTATTTGTGCCAACCCC
GATGTCATTGTTCATTATGGAAATCAGCAGTTTTGGTGTGCTGGTGCCCTAGCGCGTCTTTACCAACAATTAGGGGGTGA
GGTGCGCATCGCCGGTAAACCTCATGCGCCTATTTATGAGTGTGCCTTTGAAAAACTTCAAAAAATTCGCGGTGCAGTAG
AAAAAAGTCAAATTCTCGCTATTGGCGATGGTCTTTTGACCGATGTTAAAGGCGCTGTTCATTTTGGTCTTGATGTGCTT
TATATCATGGGGGGGATTCATCGTTACGATTATTTGCAAAATGGTATGGTCGATAAGCAAGCTTTGCACTCTTTTCTTGA
ACATCATGGCTATAAGCCACAAGCGGTAATGTGGGCACTGCAGTAA

Upstream 100 bases:

>100_bases
ACAATGTTGAAAAAGCGGATGACAGAAGACTACTCTTTCGATAAGTCGTTTTGAAGTAAAAGACAGTTTGAGAAATGGCA
AAGATATAAATAGGTGTAAC

Downstream 100 bases:

>100_bases
TGTCTGATTTTTTGCGTCTTCAAGGGATTGATATGCTTCCTTTGGTTTGGAAAGGGGCGGTATTGGCACTTGGAAATTTT
GATGGTGTGCATTGTGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Hydrolase; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNELTHIDTVIEDYDAVFCDVWGVVHNGVHAFEPALKVLHKIRKMGKNVIFLTNSPRPRENIVDQLQSMNVHSDCYDAII
TSGDVTRDLIRAAPRRVFFIGQQRDLVLFEGLDCELVEEWEASVVVCSGFLEGFEEKPSAYEDMFHRMRARNLPFICANP
DVIVHYGNQQFWCAGALARLYQQLGGEVRIAGKPHAPIYECAFEKLQKIRGAVEKSQILAIGDGLLTDVKGAVHFGLDVL
YIMGGIHRYDYLQNGMVDKQALHSFLEHHGYKPQAVMWALQ

Sequences:

>Translated_281_residues
MNELTHIDTVIEDYDAVFCDVWGVVHNGVHAFEPALKVLHKIRKMGKNVIFLTNSPRPRENIVDQLQSMNVHSDCYDAII
TSGDVTRDLIRAAPRRVFFIGQQRDLVLFEGLDCELVEEWEASVVVCSGFLEGFEEKPSAYEDMFHRMRARNLPFICANP
DVIVHYGNQQFWCAGALARLYQQLGGEVRIAGKPHAPIYECAFEKLQKIRGAVEKSQILAIGDGLLTDVKGAVHFGLDVL
YIMGGIHRYDYLQNGMVDKQALHSFLEHHGYKPQAVMWALQ
>Mature_281_residues
MNELTHIDTVIEDYDAVFCDVWGVVHNGVHAFEPALKVLHKIRKMGKNVIFLTNSPRPRENIVDQLQSMNVHSDCYDAII
TSGDVTRDLIRAAPRRVFFIGQQRDLVLFEGLDCELVEEWEASVVVCSGFLEGFEEKPSAYEDMFHRMRARNLPFICANP
DVIVHYGNQQFWCAGALARLYQQLGGEVRIAGKPHAPIYECAFEKLQKIRGAVEKSQILAIGDGLLTDVKGAVHFGLDVL
YIMGGIHRYDYLQNGMVDKQALHSFLEHHGYKPQAVMWALQ

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31845; Mature: 31845

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELTHIDTVIEDYDAVFCDVWGVVHNGVHAFEPALKVLHKIRKMGKNVIFLTNSPRPRE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
NIVDQLQSMNVHSDCYDAIITSGDVTRDLIRAAPRRVFFIGQQRDLVLFEGLDCELVEEW
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHH
EASVVVCSGFLEGFEEKPSAYEDMFHRMRARNLPFICANPDVIVHYGNQQFWCAGALARL
CCHHEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHHH
YQQLGGEVRIAGKPHAPIYECAFEKLQKIRGAVEKSQILAIGDGLLTDVKGAVHFGLDVL
HHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHH
YIMGGIHRYDYLQNGMVDKQALHSFLEHHGYKPQAVMWALQ
HHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MNELTHIDTVIEDYDAVFCDVWGVVHNGVHAFEPALKVLHKIRKMGKNVIFLTNSPRPRE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
NIVDQLQSMNVHSDCYDAIITSGDVTRDLIRAAPRRVFFIGQQRDLVLFEGLDCELVEEW
HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHH
EASVVVCSGFLEGFEEKPSAYEDMFHRMRARNLPFICANPDVIVHYGNQQFWCAGALARL
CCHHEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHHH
YQQLGGEVRIAGKPHAPIYECAFEKLQKIRGAVEKSQILAIGDGLLTDVKGAVHFGLDVL
HHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHH
YIMGGIHRYDYLQNGMVDKQALHSFLEHHGYKPQAVMWALQ
HHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA