| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475874
Identifier: 49475874
GI number: 49475874
Start: 1264738
End: 1265394
Strand: Reverse
Name: 49475874
Synonym: BH11460
Alternate gene names: NA
Gene position: 1265394-1264738 (Counterclockwise)
Preceding gene: 49475877
Following gene: 49475873
Centisome position: 65.53
GC content: 33.33
Gene sequence:
>657_bases ATGCGTGTGTTAAGAGATTTCGTAAGCTTCAAGAAAAGTGATTTTGATGATTTTAGAGATCAAGGTAATTGTTGGTTAGA ATGTGATATAAGGAGTAGATATTTTATCGAAGATCGATGTGTTTTTAGGGATCCCAAATTCTATAATGATTCTTATATTT GCGATAGAATCTATATTTATGATAATGGGCAAATATATTGTATGTCGTTTGTTTCTAGTGTCACTGTTGGTTATGGTAAG GCACAAGCATATGGACCTATAGAGATTTGCAGAAGTGCGTATGTTTCCAATAAGATAAAGATTATCCTTCATTCCAAAGG GAGTGGTAATGCATATATTTATGGTGATGCAAAAGTTTATGACTATGTCTGTATCACAAATTCTTTTGAAGTTTATTGTA AGGCGCGTATTTACAATATTCAAGTTTATGATTCTGCTCAATTTTTCGCAAACTCTCAGATTTATAACAACGCTTTAGTT TGCGGTTATGTAAAGATTCGTAAAAAGACAAAAATTTATTGTAATGCCGAGGTTGGTAATTGTGAAGATTTGCGTAATGA CGAAGAGACTTACATATTTTTCTGTATTCTCCATGGTGCAAAAGAGGCAAATACGAACAATGGGAGTAAGGCATGTGTTG AGTATCTTCCACCGTGA
Upstream 100 bases:
>100_bases AGGAAAAGAATTATGGCTGTAGAAACACAAATTCATAGGTAAAAAATGCTGTTTTTCCTTTTGTTTTAATAAATGGGTTC ATCGTTAGATGGTGTATCGC
Downstream 100 bases:
>100_bases GTGTTGTTTAAAATCAATTATGTTCTTGCGTTTGGTGTGAATAAATCCAAAGGGCGTGAGGGTATGGAGTAGAGCTGCTT TACGTCATTTATTAGCGTGT
Product: phage related protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRVLRDFVSFKKSDFDDFRDQGNCWLECDIRSRYFIEDRCVFRDPKFYNDSYICDRIYIYDNGQIYCMSFVSSVTVGYGK AQAYGPIEICRSAYVSNKIKIILHSKGSGNAYIYGDAKVYDYVCITNSFEVYCKARIYNIQVYDSAQFFANSQIYNNALV CGYVKIRKKTKIYCNAEVGNCEDLRNDEETYIFFCILHGAKEANTNNGSKACVEYLPP
Sequences:
>Translated_218_residues MRVLRDFVSFKKSDFDDFRDQGNCWLECDIRSRYFIEDRCVFRDPKFYNDSYICDRIYIYDNGQIYCMSFVSSVTVGYGK AQAYGPIEICRSAYVSNKIKIILHSKGSGNAYIYGDAKVYDYVCITNSFEVYCKARIYNIQVYDSAQFFANSQIYNNALV CGYVKIRKKTKIYCNAEVGNCEDLRNDEETYIFFCILHGAKEANTNNGSKACVEYLPP >Mature_218_residues MRVLRDFVSFKKSDFDDFRDQGNCWLECDIRSRYFIEDRCVFRDPKFYNDSYICDRIYIYDNGQIYCMSFVSSVTVGYGK AQAYGPIEICRSAYVSNKIKIILHSKGSGNAYIYGDAKVYDYVCITNSFEVYCKARIYNIQVYDSAQFFANSQIYNNALV CGYVKIRKKTKIYCNAEVGNCEDLRNDEETYIFFCILHGAKEANTNNGSKACVEYLPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25297; Mature: 25297
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLRDFVSFKKSDFDDFRDQGNCWLECDIRSRYFIEDRCVFRDPKFYNDSYICDRIYIY CHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCEEEEECEEEEECCCCCCCCEEEEEEEEE DNGQIYCMSFVSSVTVGYGKAQAYGPIEICRSAYVSNKIKIILHSKGSGNAYIYGDAKVY ECCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCEEE DYVCITNSFEVYCKARIYNIQVYDSAQFFANSQIYNNALVCGYVKIRKKTKIYCNAEVGN EEEEEECCEEEEEEEEEEEEEEECCHHEEECCEEECCEEEEEEEEEEEEEEEEEECCCCC CEDLRNDEETYIFFCILHGAKEANTNNGSKACVEYLPP HHHCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MRVLRDFVSFKKSDFDDFRDQGNCWLECDIRSRYFIEDRCVFRDPKFYNDSYICDRIYIY CHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCEEEEECEEEEECCCCCCCCEEEEEEEEE DNGQIYCMSFVSSVTVGYGKAQAYGPIEICRSAYVSNKIKIILHSKGSGNAYIYGDAKVY ECCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCEEE DYVCITNSFEVYCKARIYNIQVYDSAQFFANSQIYNNALVCGYVKIRKKTKIYCNAEVGN EEEEEECCEEEEEEEEEEEEEEECCHHEEECCEEECCEEEEEEEEEEEEEEEEEECCCCC CEDLRNDEETYIFFCILHGAKEANTNNGSKACVEYLPP HHHCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA