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The map label for this gene is ybcS [C]

Identifier: 49475812

GI number: 49475812

Start: 1174877

End: 1175326

Strand: Reverse

Name: ybcS [C]

Synonym: BH10740

Alternate gene names: 49475812

Gene position: 1175326-1174877 (Counterclockwise)

Preceding gene: 49475813

Following gene: 49475811

Centisome position: 60.86

GC content: 43.78

Gene sequence:

>450_bases
ATGCGTATTACGCAAGAACAAGCGGAAGCAATCTTTTGTGAAGACTTAAAGCAATTTGGGAAGACAGTCGAGCAATCCGT
GAAGGTTTGTTTAACGGATGCTCAAATCGCAGCATTAGTGTCGTTTTGTTATAATGTAGAGACGCAAGCCTTTTGCAAGT
CGACCTTGTTAAAAAAACTCAATAATGGTGCTTATGAGTCTGTTCCAGCTGAACTACAGAAATGGAATAAGGTAGGAGGT
AAGGCCATCCAGGGGTTTGTAAACCGTAGAGCCGCAGAGGCGGGGTTATGGGCAAAAGGGTCTTATGTTTGCTTTAACAC
GCAAAGAGTAGAAACAAAAAATACAATAGGTCTTCTCAAAATAGAGACCCTAGCGCCGATGATAGGGTCTTGTTCAGGAC
TTGGTGGGCTCTTGGTTGGCAATGGGCCTTTGCCGGCATTATGGTTTTAG

Upstream 100 bases:

>100_bases
GGGAAGGTTTACGGTTAGAGGCCTGTAAAGATACAGTGTGTGTTTGGAGCATAGGTTATGGTCATCCAGTGAAGAGGGTC
CTCCGATTGTCAAAAAAGGA

Downstream 100 bases:

>100_bases
CCGCCTGTACAGGCATTGTGATTGTCTTCAAACGGTTTAAGGAGCAGTGTTTATGATTTTTTGGTTCAAAAGACATCTGT
TTCTTGTGATGATGGCTTTA

Product: Phage related lysozyme

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Phage Related Lysozyme; Phage Lysozyme; Phage-Related Lysozyme; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Phage Lysozyme Lysis Protein; Gifsy-2 Prophage Lysozyme; Endolysin; Bacteriophage Lysozyme; Phage Lysozome; APSE-2 Prophage; Glycoside Hydrolase

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRITQEQAEAIFCEDLKQFGKTVEQSVKVCLTDAQIAALVSFCYNVETQAFCKSTLLKKLNNGAYESVPAELQKWNKVGG
KAIQGFVNRRAAEAGLWAKGSYVCFNTQRVETKNTIGLLKIETLAPMIGSCSGLGGLLVGNGPLPALWF

Sequences:

>Translated_149_residues
MRITQEQAEAIFCEDLKQFGKTVEQSVKVCLTDAQIAALVSFCYNVETQAFCKSTLLKKLNNGAYESVPAELQKWNKVGG
KAIQGFVNRRAAEAGLWAKGSYVCFNTQRVETKNTIGLLKIETLAPMIGSCSGLGGLLVGNGPLPALWF
>Mature_149_residues
MRITQEQAEAIFCEDLKQFGKTVEQSVKVCLTDAQIAALVSFCYNVETQAFCKSTLLKKLNNGAYESVPAELQKWNKVGG
KAIQGFVNRRAAEAGLWAKGSYVCFNTQRVETKNTIGLLKIETLAPMIGSCSGLGGLLVGNGPLPALWF

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 16194; Mature: 16194

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITQEQAEAIFCEDLKQFGKTVEQSVKVCLTDAQIAALVSFCYNVETQAFCKSTLLKKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NNGAYESVPAELQKWNKVGGKAIQGFVNRRAAEAGLWAKGSYVCFNTQRVETKNTIGLLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCEEEEE
IETLAPMIGSCSGLGGLLVGNGPLPALWF
HHHHHHHHHCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRITQEQAEAIFCEDLKQFGKTVEQSVKVCLTDAQIAALVSFCYNVETQAFCKSTLLKKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NNGAYESVPAELQKWNKVGGKAIQGFVNRRAAEAGLWAKGSYVCFNTQRVETKNTIGLLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCCEEEEE
IETLAPMIGSCSGLGGLLVGNGPLPALWF
HHHHHHHHHCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA