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The map label for this gene is perM [C]

Identifier: 49475709

GI number: 49475709

Start: 1047975

End: 1049186

Strand: Reverse

Name: perM [C]

Synonym: BH09550

Alternate gene names: 49475709

Gene position: 1049186-1047975 (Counterclockwise)

Preceding gene: 49475712

Following gene: 49475708

Centisome position: 54.33

GC content: 36.8

Gene sequence:

>1212_bases
ATGAGTAAGATATCAGATAACCATGATCATTCTGCTTTGCAGTTTATGAAAAAGAAAGTTCGTGAGAATGGATCCCGTGA
TATTCGTCAGATTTATGTGCCAGCTTATACTCAAGTACCGTTACCAAATAATATGAAAAAGCAAATTTTTTTCTGGCTTG
GTGCGCTGATTTTTTTCATTCTTTTTATGCTTGTTTTTGGATCAATTTTGCTTCCTTTTGTAGCAGGGATTGTGTTGGCT
TACTTTCTTAATCCGATTGTTCAATTGCTTGAAAAATTTCGTATTCGTCGTGTTTTTGGCACTATTCTCATTACTTTGTT
TATTGTTGTGGTTTTTGTTGCTGCTTTAATCATTTTGATTCCTATTATCAGTTGGCAAATACAGCAATTTATGAACGATG
GGTTGCCCGTTTATATTAATCGTATTCAAACTTTTTTCGTTGAACATGATTTTGATTGGGTTAGACGCTATTTTGGAAGT
GATCCAAATGAATTACAGAGTAATATTAAGGGGCTTTTAGGACAAAGTTCTGATTTTATTACATCTCTCTTGAATTCACT
TTTGAAATCAGGAAAATCTCTCGTAAATATCGTCAGTCTCTTTGTTGTGGCACCTGTGGTGGCGTTTTACATGTTATTGG
ATTGGCCACGTATGGTTACAGCAGTTGATTCGTTGATACCACGGGATCATCTTGAAACTGTTCGCAGTATTTTTCATGAA
ATGGATAGAGCTATCGCTGGTTTTGTTCGTGGTCAAGGAACAGCTTGTTTAATATTGGGGGGATATTATGCTATTGGTTT
GACCATTACGGAGCTCAATTTTGGTCTTTTAATTGGTATGTTTATTGGCCTTATTAGTTTTGTTCCTTATATTGGTACAA
TGAGTGGTTTTTTACTCTCTGTTGGTGTTGCGTGGGTCCAGTTCTACCCAAATAATTGGGGGTGGATCATTGTTGTTATG
GTTATATTTTTAATTGGTCAATTCATTGAAGGCTATATTCTTCAACCAAAACTTGTGGGTTCGTCAGTGGGGCTGCATCC
GGTATGGTTAATGTTTGCGCTTTTTGCTTTTTCTTCACTCTTTGGTTTCACTGGTATGCTTATTGCTGTTCCTGCGGCTG
CTGCTGTTGGTGTTTTGGTTCGTTTTGCTCTTCATACTTATCTTAATTCTCAGATGTATTCGCGAAGTGGAAATTCGGAG
AGGCTAGAATGA

Upstream 100 bases:

>100_bases
ATCTCTGCAAGAGATATTGATAAGAAAATAAACGACTTTGCTTGTGACCCATGTAAAAGAAGTTTATAATTTTTGTGAAG
AGTTTTTTTTAGGATATTTT

Downstream 100 bases:

>100_bases
ATAAGCGTGAAACACAATTACCCTTGAATTTTTCTTATAATCCGATTTTCCAATTTGATGACTTGGTGGTAACGGAGAGC
AATCGTATGGCTTTTCAGCT

Product: permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSKISDNHDHSALQFMKKKVRENGSRDIRQIYVPAYTQVPLPNNMKKQIFFWLGALIFFILFMLVFGSILLPFVAGIVLA
YFLNPIVQLLEKFRIRRVFGTILITLFIVVVFVAALIILIPIISWQIQQFMNDGLPVYINRIQTFFVEHDFDWVRRYFGS
DPNELQSNIKGLLGQSSDFITSLLNSLLKSGKSLVNIVSLFVVAPVVAFYMLLDWPRMVTAVDSLIPRDHLETVRSIFHE
MDRAIAGFVRGQGTACLILGGYYAIGLTITELNFGLLIGMFIGLISFVPYIGTMSGFLLSVGVAWVQFYPNNWGWIIVVM
VIFLIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFSSLFGFTGMLIAVPAAAAVGVLVRFALHTYLNSQMYSRSGNSE
RLE

Sequences:

>Translated_403_residues
MSKISDNHDHSALQFMKKKVRENGSRDIRQIYVPAYTQVPLPNNMKKQIFFWLGALIFFILFMLVFGSILLPFVAGIVLA
YFLNPIVQLLEKFRIRRVFGTILITLFIVVVFVAALIILIPIISWQIQQFMNDGLPVYINRIQTFFVEHDFDWVRRYFGS
DPNELQSNIKGLLGQSSDFITSLLNSLLKSGKSLVNIVSLFVVAPVVAFYMLLDWPRMVTAVDSLIPRDHLETVRSIFHE
MDRAIAGFVRGQGTACLILGGYYAIGLTITELNFGLLIGMFIGLISFVPYIGTMSGFLLSVGVAWVQFYPNNWGWIIVVM
VIFLIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFSSLFGFTGMLIAVPAAAAVGVLVRFALHTYLNSQMYSRSGNSE
RLE
>Mature_402_residues
SKISDNHDHSALQFMKKKVRENGSRDIRQIYVPAYTQVPLPNNMKKQIFFWLGALIFFILFMLVFGSILLPFVAGIVLAY
FLNPIVQLLEKFRIRRVFGTILITLFIVVVFVAALIILIPIISWQIQQFMNDGLPVYINRIQTFFVEHDFDWVRRYFGSD
PNELQSNIKGLLGQSSDFITSLLNSLLKSGKSLVNIVSLFVVAPVVAFYMLLDWPRMVTAVDSLIPRDHLETVRSIFHEM
DRAIAGFVRGQGTACLILGGYYAIGLTITELNFGLLIGMFIGLISFVPYIGTMSGFLLSVGVAWVQFYPNNWGWIIVVMV
IFLIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFSSLFGFTGMLIAVPAAAAVGVLVRFALHTYLNSQMYSRSGNSER
LE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=333, Percent_Identity=27.6276276276276, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 45428; Mature: 45296

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00591 GLYCOSYL_HYDROL_F10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SKISDNHDHSALQFMKKKVRENGSRDIRQIYVPAYTQVPLPNNMKKQIFFWLGALIFFI
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LFMLVFGSILLPFVAGIVLAYFLNPIVQLLEKFRIRRVFGTILITLFIVVVFVAALIILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIISWQIQQFMNDGLPVYINRIQTFFVEHDFDWVRRYFGSDPNELQSNIKGLLGQSSDFI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH
TSLLNSLLKSGKSLVNIVSLFVVAPVVAFYMLLDWPRMVTAVDSLIPRDHLETVRSIFHE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MDRAIAGFVRGQGTACLILGGYYAIGLTITELNFGLLIGMFIGLISFVPYIGTMSGFLLS
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVAWVQFYPNNWGWIIVVMVIFLIGQFIEGYILQPKLVGSSVGLHPVWLMFALFAFSSL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH
FGFTGMLIAVPAAAAVGVLVRFALHTYLNSQMYSRSGNSERLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]