Click here to switch to the map view.

The map label for this gene is 49475539

Identifier: 49475539

GI number: 49475539

Start: 880369

End: 880797

Strand: Reverse

Name: 49475539

Synonym: BH07680

Alternate gene names: NA

Gene position: 880797-880369 (Counterclockwise)

Preceding gene: 49475543

Following gene: 49475538

Centisome position: 45.61

GC content: 35.2

Gene sequence:

>429_bases
ATGATTGATAATATCTACAGTGATAAAATACTTGAATATGCTGCCAATATAAGCAAAATTGGACGTCTTAATAAACCGGA
TGCAACATCAAAAAAACATGCACGACTTTGCGGCTCAACAATCACTGTAGATCTAAAAATAGAAAATGATATTGTTACAG
ATTTTGCTCATGAAGTACGTGCATGTGTACTAGGACAAGCTGCTGCTTCACTTTTAGCATATCATATCATCGGCCAAACA
ACACAAAATCTTAAAATGTTACGTGAAATTATCTATCATATGCTGACAGAAGATGGACCTCCTCCTCCAGCTCCATTTGA
AGCATTTTCCTGTTTGCAGCCCATTAAAAACTATAAAGCACGCCACACATCAACGTTGCTCATTTTTGATGCCGTTATAG
ATTGTATTCAACAAATTGAAGAAAAATAA

Upstream 100 bases:

>100_bases
CAAAGCGTTTGCTCTATATCCATTTCATCCTGTATAATCTCTATATAATCGAATTAAAAGCTTAAACAATCACGGCTTTC
GAAATTTCAGGCAATAGGTC

Downstream 100 bases:

>100_bases
ATGTTTAATCCATATCCTCAGAAAAAAAAGAGACAAACTCGCAATTATACAGGCCCTTGGCGAAAAACACCAGGACGATT
ACTTGGTCTTCTATTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NIFU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; NifU Family SUF System FeS Assembly Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; NifU-Like Involved In Fe-S Cluster Formation; Nitrogen Fixation Protein NifU

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIDNIYSDKILEYAANISKIGRLNKPDATSKKHARLCGSTITVDLKIENDIVTDFAHEVRACVLGQAAASLLAYHIIGQT
TQNLKMLREIIYHMLTEDGPPPPAPFEAFSCLQPIKNYKARHTSTLLIFDAVIDCIQQIEEK

Sequences:

>Translated_142_residues
MIDNIYSDKILEYAANISKIGRLNKPDATSKKHARLCGSTITVDLKIENDIVTDFAHEVRACVLGQAAASLLAYHIIGQT
TQNLKMLREIIYHMLTEDGPPPPAPFEAFSCLQPIKNYKARHTSTLLIFDAVIDCIQQIEEK
>Mature_142_residues
MIDNIYSDKILEYAANISKIGRLNKPDATSKKHARLCGSTITVDLKIENDIVTDFAHEVRACVLGQAAASLLAYHIIGQT
TQNLKMLREIIYHMLTEDGPPPPAPFEAFSCLQPIKNYKARHTSTLLIFDAVIDCIQQIEEK

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15870; Mature: 15870

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNIYSDKILEYAANISKIGRLNKPDATSKKHARLCGSTITVDLKIENDIVTDFAHEVR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEEECCHHHHHHHHHHH
ACVLGQAAASLLAYHIIGQTTQNLKMLREIIYHMLTEDGPPPPAPFEAFSCLQPIKNYKA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RHTSTLLIFDAVIDCIQQIEEK
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDNIYSDKILEYAANISKIGRLNKPDATSKKHARLCGSTITVDLKIENDIVTDFAHEVR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEEECCHHHHHHHHHHH
ACVLGQAAASLLAYHIIGQTTQNLKMLREIIYHMLTEDGPPPPAPFEAFSCLQPIKNYKA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
RHTSTLLIFDAVIDCIQQIEEK
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA