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The map label for this gene is 49475531

Identifier: 49475531

GI number: 49475531

Start: 873241

End: 873720

Strand: Reverse

Name: 49475531

Synonym: BH07600

Alternate gene names: NA

Gene position: 873720-873241 (Counterclockwise)

Preceding gene: 49475537

Following gene: 49475524

Centisome position: 45.25

GC content: 34.79

Gene sequence:

>480_bases
GTGTCCCACAGAATACCTTTAATCAAACATAAGTTATTGATTGGTCTGTTAATAGCAAGCATAGTAGCAATTGGCGGTTG
TAGTCTTGTTGATTCCTCAGGCTCAAGCCAAATATATAAAGAAGGTTATATTCTTGATAAAAATGCTCTTGATTCCATTT
CTATTGGATCAAGTCAGGAGCAAGTTATTTTAGCTTTAGGAACCCCATCTCTAAAAACAAAATATGATAATGAGGTCTTT
TATTATATCTCACAAACTCGTTACCGTGGGATGCAGTTTATGAAAACAAAAATTATTGATCGTAAAGTTTTAGCCATTTA
TTTCAATAAAAATGATCAGGTTACTAAAATAGCTAACTATGGACTACAAGATGGTCAAGTGTTTGATTTTATCGCGCAAA
CAACTCCAACTGCGACTAAGGAACAACCTCTCTTGATCCAGATTATTAAAGGTCCTGCAAATCTACCGGCCCATGACTAA

Upstream 100 bases:

>100_bases
AGATTAAGCTAAAATAAGAAAAAACTTGAGGTTGCCTTCTTGTTATACGTCTAACTATAAACTTATACCTAAGTATAAAA
GGGAGATATCGTTGTTGCAA

Downstream 100 bases:

>100_bases
GTTTATAACAGTCTACATGAAGTAGTGATAATGTCAGGCCTGCTAATGTTGGGCCTAAGAATTTCGCAATTTTAACGCTA
TTTTAAAAGGCGAATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: SmpA/OmlA; SmpA/OmlA Domain Protein; Outer Membrane Protein; SmpA/OmlA Family Outer Membrane Protein; SmAll Protein A; SmpA / OmlA Family; SmpA Protein; Small Protein A

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSHRIPLIKHKLLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQEQVILALGTPSLKTKYDNEVF
YYISQTRYRGMQFMKTKIIDRKVLAIYFNKNDQVTKIANYGLQDGQVFDFIAQTTPTATKEQPLLIQIIKGPANLPAHD

Sequences:

>Translated_159_residues
MSHRIPLIKHKLLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQEQVILALGTPSLKTKYDNEVF
YYISQTRYRGMQFMKTKIIDRKVLAIYFNKNDQVTKIANYGLQDGQVFDFIAQTTPTATKEQPLLIQIIKGPANLPAHD
>Mature_158_residues
SHRIPLIKHKLLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQEQVILALGTPSLKTKYDNEVFY
YISQTRYRGMQFMKTKIIDRKVLAIYFNKNDQVTKIANYGLQDGQVFDFIAQTTPTATKEQPLLIQIIKGPANLPAHD

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17636; Mature: 17505

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRIPLIKHKLLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQE
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEECCCEEECCCCCCCEECCCCCC
QVILALGTPSLKTKYDNEVFYYISQTRYRGMQFMKTKIIDRKVLAIYFNKNDQVTKIANY
EEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEHHHC
GLQDGQVFDFIAQTTPTATKEQPLLIQIIKGPANLPAHD
CCCCCHHEEHHHHCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SHRIPLIKHKLLIGLLIASIVAIGGCSLVDSSGSSQIYKEGYILDKNALDSISIGSSQE
CCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEECCCEEECCCCCCCEECCCCCC
QVILALGTPSLKTKYDNEVFYYISQTRYRGMQFMKTKIIDRKVLAIYFNKNDQVTKIANY
EEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEHHHC
GLQDGQVFDFIAQTTPTATKEQPLLIQIIKGPANLPAHD
CCCCCHHEEHHHHCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA