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The map label for this gene is ybaQ [C]

Identifier: 49475446

GI number: 49475446

Start: 785004

End: 785312

Strand: Reverse

Name: ybaQ [C]

Synonym: BH06620

Alternate gene names: 49475446

Gene position: 785312-785004 (Counterclockwise)

Preceding gene: 49475447

Following gene: 49475445

Centisome position: 40.67

GC content: 41.42

Gene sequence:

>309_bases
ATGAATGATATTCCAGTTCAACACAATAAAAACCGCTGTCCTTCTCATCCAGGCGATCTATTAGCAGAAATCATTCCAGC
AACTGGCAAAACAAAATTAGAAATTGCACAGATGCTTGGTATATCAAGACAACATCTTTATGCGATCTTAAGAGCGAAAA
AGCCAATTTCCCCTTCTGTTTCCGCGCGTTTAGGCAAATTATTTGGAGATGGAGCCGCTGTTTGGTTACGTATGCAAGCA
GCCTATGACGCTTGGCATGCCGAGCATGAAACAGATGTTAGTCAAATTCCAACTCTCCATGTTGTCTAA

Upstream 100 bases:

>100_bases
TACACCGTACATATAAATGGACCATGGTGCATTACATTTGAATTTGACTCATGTAACGCTTATCGGGTTGACCTTGAACA
ATACCACTAAGGATAAAATC

Downstream 100 bases:

>100_bases
AAACGATATTATCAACACAAAAATCTATACTGTATCTTATATTTTTCTTGTTTTGTATCAATATTTTATAATAACCAAAA
TCTTCACAAAGAGTATTCAG

Product: virulence-associated protein

Products: NA

Alternate protein names: Virulence-Associated Protein; Plasmid Maintenance System Antidote Protein XRE Family; Addiction Module Antidote Protein HigA Family; Proteic Killer Active Protein; Antitoxin Of Plasmid Maintenance System; Plasmid Maintenance System Antidote Protein VapI

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNDIPVQHNKNRCPSHPGDLLAEIIPATGKTKLEIAQMLGISRQHLYAILRAKKPISPSVSARLGKLFGDGAAVWLRMQA
AYDAWHAEHETDVSQIPTLHVV

Sequences:

>Translated_102_residues
MNDIPVQHNKNRCPSHPGDLLAEIIPATGKTKLEIAQMLGISRQHLYAILRAKKPISPSVSARLGKLFGDGAAVWLRMQA
AYDAWHAEHETDVSQIPTLHVV
>Mature_102_residues
MNDIPVQHNKNRCPSHPGDLLAEIIPATGKTKLEIAQMLGISRQHLYAILRAKKPISPSVSARLGKLFGDGAAVWLRMQA
AYDAWHAEHETDVSQIPTLHVV

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11242; Mature: 11242

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIPVQHNKNRCPSHPGDLLAEIIPATGKTKLEIAQMLGISRQHLYAILRAKKPISPSV
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
SARLGKLFGDGAAVWLRMQAAYDAWHAEHETDVSQIPTLHVV
HHHHHHHHCCCHHEEHHHHHHHHHHCCCCCCCHHHCCEEECC
>Mature Secondary Structure
MNDIPVQHNKNRCPSHPGDLLAEIIPATGKTKLEIAQMLGISRQHLYAILRAKKPISPSV
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
SARLGKLFGDGAAVWLRMQAAYDAWHAEHETDVSQIPTLHVV
HHHHHHHHCCCHHEEHHHHHHHHHHCCCCCCCHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA