| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is hisJ [H]
Identifier: 49475425
GI number: 49475425
Start: 744744
End: 745496
Strand: Reverse
Name: hisJ [H]
Synonym: BH06370
Alternate gene names: 49475425
Gene position: 745496-744744 (Counterclockwise)
Preceding gene: 49475426
Following gene: 49475424
Centisome position: 38.61
GC content: 35.46
Gene sequence:
>753_bases ATGAAATTATTAGCTGTAGCCCTCATAACAAATTTAGTACTGTTCACCCAATTGGCCAATGCTAAAACGCTGAAAATTGC AAGTGATGCTTCCTATCCCCCATTCAGTTACGTCAACTCAAATAACGAGCTTCAGGGTTTTGATATTGATATATCTTATG CACTGTGCAAAAAAATGAATGTCGAGTGTACTATCGTCACCCAAGACTTTGAGGGAATGATTCCTGGCCTTCTTGCAAAA AAATACGATGCTATCATTTCTTCTCTCGCTCCTACAGAAGAGCGCTTACAAAAAATTGACTTCACAGACGCATACTACAG TACAGAATTGGTTGTAATCGTTCACAAAGATTCAGGAATTAAAGAAATCTCGGCAGAAGCTTTTAAAGATAAGAATCTTG GTGTACAATCAAATACAACACAAGCTGTGTACGCAGAAGATCATTATGCAGCTGAGGGTGTGAATATCAAACTTTATCCT ACAGCAATAGAAGTTAAACGTGATCTTTTAAGTCATAGGCTTGATATCGTCATCTCTGATAAACTGGCAGCAGTAAACTG GCTAGAAAATGAAGAAAAAGATTGCTGTCAACTTCTTGGTAGTCTGAAAAAAACAAAACTGCCTATCGCAATTGCTATAC GCAAAAATAATAACGATCTTAAAAATAAGTTCAATGAAGCAATAAAAGAAATCCGTGAGGACGGAACTTATGATAAAATT ATGAAGAAATATTTTACATTCGATATTTATTAA
Upstream 100 bases:
>100_bases TGAATCCCAATAAATTTTTTATATTGCTCTTAGAAAACCTTACAGATTATAAAATACATGATGATTTAATATTCTCTCGC TTATCTGATAGGAGAACATA
Downstream 100 bases:
>100_bases AAATATCAATATAAACTAAATTTGAACAAATTATTTATTTGTAAGAAAATTTATCTAAATTTTTGTGAGGAGCACAAGGA TGGCCCAAAATTTAGCATTG
Product: ABC transporter, periplasmic amino acid-binding protein
Products: ADP; phosphate; L-histidine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKLLAVALITNLVLFTQLANAKTLKIASDASYPPFSYVNSNNELQGFDIDISYALCKKMNVECTIVTQDFEGMIPGLLAK KYDAIISSLAPTEERLQKIDFTDAYYSTELVVIVHKDSGIKEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEGVNIKLYP TAIEVKRDLLSHRLDIVISDKLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLKNKFNEAIKEIREDGTYDKI MKKYFTFDIY
Sequences:
>Translated_250_residues MKLLAVALITNLVLFTQLANAKTLKIASDASYPPFSYVNSNNELQGFDIDISYALCKKMNVECTIVTQDFEGMIPGLLAK KYDAIISSLAPTEERLQKIDFTDAYYSTELVVIVHKDSGIKEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEGVNIKLYP TAIEVKRDLLSHRLDIVISDKLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLKNKFNEAIKEIREDGTYDKI MKKYFTFDIY >Mature_250_residues MKLLAVALITNLVLFTQLANAKTLKIASDASYPPFSYVNSNNELQGFDIDISYALCKKMNVECTIVTQDFEGMIPGLLAK KYDAIISSLAPTEERLQKIDFTDAYYSTELVVIVHKDSGIKEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEGVNIKLYP TAIEVKRDLLSHRLDIVISDKLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLKNKFNEAIKEIREDGTYDKI MKKYFTFDIY
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=39.3162393162393, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1788649, Length=255, Percent_Identity=37.2549019607843, Blast_Score=170, Evalue=7e-44, Organism=Escherichia coli, GI1787085, Length=253, Percent_Identity=36.7588932806324, Blast_Score=140, Evalue=9e-35, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=31.4516129032258, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788228, Length=257, Percent_Identity=27.2373540856031, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=28.2786885245902, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28180; Mature: 28180
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLAVALITNLVLFTQLANAKTLKIASDASYPPFSYVNSNNELQGFDIDISYALCKKMN CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEEHHHHHHCCC VECTIVTQDFEGMIPGLLAKKYDAIISSLAPTEERLQKIDFTDAYYSTELVVIVHKDSGI CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECEEEEEEEECCCCC KEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEGVNIKLYPTAIEVKRDLLSHRLDIVISD HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHCEEECC KLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLKNKFNEAIKEIREDGTYDKI CHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH MKKYFTFDIY HHHHHHCCCC >Mature Secondary Structure MKLLAVALITNLVLFTQLANAKTLKIASDASYPPFSYVNSNNELQGFDIDISYALCKKMN CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEEHHHHHHCCC VECTIVTQDFEGMIPGLLAKKYDAIISSLAPTEERLQKIDFTDAYYSTELVVIVHKDSGI CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECEEEEEEEECCCCC KEISAEAFKDKNLGVQSNTTQAVYAEDHYAAEGVNIKLYPTAIEVKRDLLSHRLDIVISD HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHCEEECC KLAAVNWLENEEKDCCQLLGSLKKTKLPIAIAIRKNNNDLKNKFNEAIKEIREDGTYDKI CHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH MKKYFTFDIY HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]