| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475408
Identifier: 49475408
GI number: 49475408
Start: 727614
End: 728075
Strand: Reverse
Name: 49475408
Synonym: BH06200
Alternate gene names: NA
Gene position: 728075-727614 (Counterclockwise)
Preceding gene: 49475422
Following gene: 49475407
Centisome position: 37.7
GC content: 41.77
Gene sequence:
>462_bases ATGACCAACGCAATTGAAAACCATCTCAAAAATTTTGGAATGACTCTGCCAGAAGCAACACAACCTATTGCCAATTATGT AACAGCTTCACAAAGCAGCAACCAACTCTTTATCTCTGGACAGCTCCCTCTTTTTGATGGAAAGCCTGTAGCAACCGGTA AAGTTGGTGCAACTGTCAGCACTGAACAAGCAAAAAAATCAGCCGAAGTCTGCGCACTCAATATTCTTGCACAAATTAAA GCAGCTCTGGGTGACTTAAATAAAATAAAACGCGTGGTAAAAATTACTGTTTTTGTTGCTGTAGATCCTCATTTTACTGA TATTCCTCTTGTCGCTAATGGAGCTTCTGATCTCCTCGTCAATATCCTCGGTGATGCTGGAAAACACGCCCGTTCTGCTA TTGGTGTCGCCTCTCTTCCTATGGACGTTCCAGTAGAAGTTGAAGCTATCATAGAAATCTAG
Upstream 100 bases:
>100_bases AGACAAAAAAGGTCACCGTCTTAATTAACCACACATTTCCTTCAATCGAAAAATAGTTTATGCAATAAATGTATAATAGA ATAGCTATGGAGTTTAAATT
Downstream 100 bases:
>100_bases ACTTTTATTAAATGATAGAACACCTAATACAAAACAAAAATTGAATGCCCCCTCTTTGTCAACCCTACCAACTTTCGCAC TCTTTCATTTTGAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Translation Initiation Inhibitor Protein; Transcriptional Regulator; L-PSP Family Endoribonuclease; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTNAIENHLKNFGMTLPEATQPIANYVTASQSSNQLFISGQLPLFDGKPVATGKVGATVSTEQAKKSAEVCALNILAQIK AALGDLNKIKRVVKITVFVAVDPHFTDIPLVANGASDLLVNILGDAGKHARSAIGVASLPMDVPVEVEAIIEI
Sequences:
>Translated_153_residues MTNAIENHLKNFGMTLPEATQPIANYVTASQSSNQLFISGQLPLFDGKPVATGKVGATVSTEQAKKSAEVCALNILAQIK AALGDLNKIKRVVKITVFVAVDPHFTDIPLVANGASDLLVNILGDAGKHARSAIGVASLPMDVPVEVEAIIEI >Mature_152_residues TNAIENHLKNFGMTLPEATQPIANYVTASQSSNQLFISGQLPLFDGKPVATGKVGATVSTEQAKKSAEVCALNILAQIKA ALGDLNKIKRVVKITVFVAVDPHFTDIPLVANGASDLLVNILGDAGKHARSAIGVASLPMDVPVEVEAIIEI
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16029; Mature: 15898
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAIENHLKNFGMTLPEATQPIANYVTASQSSNQLFISGQLPLFDGKPVATGKVGATVS CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEC TEQAKKSAEVCALNILAQIKAALGDLNKIKRVVKITVFVAVDPHFTDIPLVANGASDLLV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEEECCCCCCCCEEECCHHHHHH NILGDAGKHARSAIGVASLPMDVPVEVEAIIEI HHHCCCCHHHHHHCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure TNAIENHLKNFGMTLPEATQPIANYVTASQSSNQLFISGQLPLFDGKPVATGKVGATVS CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEC TEQAKKSAEVCALNILAQIKAALGDLNKIKRVVKITVFVAVDPHFTDIPLVANGASDLLV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEEECCCCCCCCEEECCHHHHHH NILGDAGKHARSAIGVASLPMDVPVEVEAIIEI HHHCCCCHHHHHHCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA