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The map label for this gene is 49475297

Identifier: 49475297

GI number: 49475297

Start: 587682

End: 588350

Strand: Reverse

Name: 49475297

Synonym: BH05020

Alternate gene names: NA

Gene position: 588350-587682 (Counterclockwise)

Preceding gene: 49475309

Following gene: 49475294

Centisome position: 30.47

GC content: 42.9

Gene sequence:

>669_bases
ATGAATAGCCAATTAAAATCGCTTTGCCCAGAACCACCGCAAAACTGCGATTTATGCCCACGTTTACATAAATTCATCTC
CGACTGGCGTATAAAAGAACCGAGCTGGTATAATGCTCCAGTACGCCCATTCTTTCCCTATAAAGGGGCAGACACAACAC
GCCTTCTCATTGTCGGTCTTGCTCCTGGATTACGCGGCGCAAACCGAACTGGACGCCCGTTTACTGGTGATTATGCTGGA
CACCTGCTTTATTCCACTTTGAAAAAGTTTGGTTTTGCCCAAGGGACGTTTGAAGAAAGAGCTGATGACACCCTTGAACT
GATTGATGCAGCAATTGTTAATTCAGTTCGTTGTGTTCCCCCAGAAAATAAACCTACTGGTGCAGAAATTAACACTTGCC
GATATTTCTTTTCACCTCTTTTAACAAATCTTCCCAAACTTAAAGCTGTTATCACCCTCGGCACCATTGCACATCATTCA
ACACTCCGTGCCCTCAATGCAAAAGTTTTAGCTCATCCCTTTGGACATGGACAAATAAACAACATCGGCAGATTACGCAT
CTTCTCAAGTTATCACTGTTCACGCTATAATACTAACACTGGTCGCTTAACGGATGCTATGTTTCATCAGATTTTCGAAG
CAGCAAAAACATATCTTGATCAAAGCTGA

Upstream 100 bases:

>100_bases
TATCAAAAAGATTGTTATTCATTATAGGTTGTTTACAAAGACATAATCGGTCATAAAATAACTGGAAAAATTCATATAAA
ATGATTGATAGCTTCTCACA

Downstream 100 bases:

>100_bases
AATCTCCTTAGAAGCATTATAAATAAGGACAGACAAACAAATCCTATCATCCATATCTTTTTAAAAGTCGTGCTTTTTCA
CGCCCCCAATCACGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNSQLKSLCPEPPQNCDLCPRLHKFISDWRIKEPSWYNAPVRPFFPYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAG
HLLYSTLKKFGFAQGTFEERADDTLELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHS
TLRALNAKVLAHPFGHGQINNIGRLRIFSSYHCSRYNTNTGRLTDAMFHQIFEAAKTYLDQS

Sequences:

>Translated_222_residues
MNSQLKSLCPEPPQNCDLCPRLHKFISDWRIKEPSWYNAPVRPFFPYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAG
HLLYSTLKKFGFAQGTFEERADDTLELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHS
TLRALNAKVLAHPFGHGQINNIGRLRIFSSYHCSRYNTNTGRLTDAMFHQIFEAAKTYLDQS
>Mature_222_residues
MNSQLKSLCPEPPQNCDLCPRLHKFISDWRIKEPSWYNAPVRPFFPYKGADTTRLLIVGLAPGLRGANRTGRPFTGDYAG
HLLYSTLKKFGFAQGTFEERADDTLELIDAAIVNSVRCVPPENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHS
TLRALNAKVLAHPFGHGQINNIGRLRIFSSYHCSRYNTNTGRLTDAMFHQIFEAAKTYLDQS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1259 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24882; Mature: 24882

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQLKSLCPEPPQNCDLCPRLHKFISDWRIKEPSWYNAPVRPFFPYKGADTTRLLIVGL
CCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
APGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDTLELIDAAIVNSVRCVP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEECCC
PENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHSTLRALNAKVLAHPFGHGQIN
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NIGRLRIFSSYHCSRYNTNTGRLTDAMFHQIFEAAKTYLDQS
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSQLKSLCPEPPQNCDLCPRLHKFISDWRIKEPSWYNAPVRPFFPYKGADTTRLLIVGL
CCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
APGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFEERADDTLELIDAAIVNSVRCVP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEECCC
PENKPTGAEINTCRYFFSPLLTNLPKLKAVITLGTIAHHSTLRALNAKVLAHPFGHGQIN
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NIGRLRIFSSYHCSRYNTNTGRLTDAMFHQIFEAAKTYLDQS
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]