| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is gp20
Identifier: 49475131
GI number: 49475131
Start: 399649
End: 400725
Strand: Reverse
Name: gp20
Synonym: BH03290
Alternate gene names: NA
Gene position: 400725-399649 (Counterclockwise)
Preceding gene: 49475132
Following gene: 49475130
Centisome position: 20.75
GC content: 41.97
Gene sequence:
>1077_bases ATGGATATGAATTTTTTTAAACATGATGCTTTCTCTGCCACCACAATGATGAAAGCGATTGAAAACTATGAGTTTCAACC GGGTCTCATTAGTTCTCTTAATCTTTTTGAGGAAGTGGAAACAAGCACCACAGTGGTTGGTATTGAAAGACGTGACAATA CATTGTCCTTGATTCAAACCAGTGAACGTGGCGCCCCCTTGGTTGAAGGTGATAGAGATGGGCGGAATCTCCGCTTTTTC AAAACAACACGTATTGCCAAAAGTGATACGGTGAAATCAGAGGAAATCCAGAACCGACGGGAATTTGGTACAGAAGACCA GTTAGAGACGGCAATGAAATATATTGCCAGAAAACAAAAGAAACTGATTTCTGAAATCGAATTGACATGGGAAAACATGC AACTTGGCGCTGTCCAGGGTGTTGTGCTTGATGCCGATGGCTCTGTTATTGTCGATTGGTACAAGGAATGGGAAATCGCA CCACCAAAGCCGATTGATTTTAAACTCAATAATGAAACAACAAATGTTGCGGATCATGTTGATCAAGTCATTATGAAAAT GATTGAAGCTTCAAAGGGAGCATTTTCTGATCGTTCACGCATTATTGGGCTTTGTGGAAATGAATTTTTCTCCAAATTGA AAAACCATAAAACAATTCGTGAGACTTATCTCAACACAGCTCTTGCACAAACTTTAAATAGTGCTGGAGGTGTTGCAACA CCAAGTGCGATTGGCTCTGGGAGCTTTGGCAGTTTTGACTTTGCGGGCGTCACTTTCATTAATTACCGGAGCATTCACAA CTATAATGTGAGTGCGAAGGCTGGAACAAAGCGCGCCATAGGCATTAAGCCTGATGAATGTCAATTCTTGCCTGCCAATG CACCGGGAGTGTTTCAAAAAACCTTTGCACCAGGAGAAAGTTTGGATTTTGCCAACACGGTTGGAAAACCTCTCTACACC ATGTTGATCGTTGATAACGACCGTAATGCATGGGTAAAACCGGAGGTCTATAGCTATCCGCTTTATATTTGCACGCGTCC TGAAATGCTCTTTAAAGCGGTCAGTGGAGGAAAATAA
Upstream 100 bases:
>100_bases ACTGCTATGGCCAGATGCCATCACAGACGATCAGAAGAAAGATGCCATTCAGTTTTTAGAAGACCATAACAACATTCTAT TTCGATAGGAGAATGCGCAC
Downstream 100 bases:
>100_bases CATGCGATGGCATGGGTTGCTTCATAAAATGATTCAAGACGTGCGCAACACCTTTGGGCAACCCGTCATCTACACGCGAA AGGATAATCAACAATCGTTT
Product: Phage protein gp20
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MDMNFFKHDAFSATTMMKAIENYEFQPGLISSLNLFEEVETSTTVVGIERRDNTLSLIQTSERGAPLVEGDRDGRNLRFF KTTRIAKSDTVKSEEIQNRREFGTEDQLETAMKYIARKQKKLISEIELTWENMQLGAVQGVVLDADGSVIVDWYKEWEIA PPKPIDFKLNNETTNVADHVDQVIMKMIEASKGAFSDRSRIIGLCGNEFFSKLKNHKTIRETYLNTALAQTLNSAGGVAT PSAIGSGSFGSFDFAGVTFINYRSIHNYNVSAKAGTKRAIGIKPDECQFLPANAPGVFQKTFAPGESLDFANTVGKPLYT MLIVDNDRNAWVKPEVYSYPLYICTRPEMLFKAVSGGK
Sequences:
>Translated_358_residues MDMNFFKHDAFSATTMMKAIENYEFQPGLISSLNLFEEVETSTTVVGIERRDNTLSLIQTSERGAPLVEGDRDGRNLRFF KTTRIAKSDTVKSEEIQNRREFGTEDQLETAMKYIARKQKKLISEIELTWENMQLGAVQGVVLDADGSVIVDWYKEWEIA PPKPIDFKLNNETTNVADHVDQVIMKMIEASKGAFSDRSRIIGLCGNEFFSKLKNHKTIRETYLNTALAQTLNSAGGVAT PSAIGSGSFGSFDFAGVTFINYRSIHNYNVSAKAGTKRAIGIKPDECQFLPANAPGVFQKTFAPGESLDFANTVGKPLYT MLIVDNDRNAWVKPEVYSYPLYICTRPEMLFKAVSGGK >Mature_358_residues MDMNFFKHDAFSATTMMKAIENYEFQPGLISSLNLFEEVETSTTVVGIERRDNTLSLIQTSERGAPLVEGDRDGRNLRFF KTTRIAKSDTVKSEEIQNRREFGTEDQLETAMKYIARKQKKLISEIELTWENMQLGAVQGVVLDADGSVIVDWYKEWEIA PPKPIDFKLNNETTNVADHVDQVIMKMIEASKGAFSDRSRIIGLCGNEFFSKLKNHKTIRETYLNTALAQTLNSAGGVAT PSAIGSGSFGSFDFAGVTFINYRSIHNYNVSAKAGTKRAIGIKPDECQFLPANAPGVFQKTFAPGESLDFANTVGKPLYT MLIVDNDRNAWVKPEVYSYPLYICTRPEMLFKAVSGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39972; Mature: 39972
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMNFFKHDAFSATTMMKAIENYEFQPGLISSLNLFEEVETSTTVVGIERRDNTLSLIQT CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEE SERGAPLVEGDRDGRNLRFFKTTRIAKSDTVKSEEIQNRREFGTEDQLETAMKYIARKQK CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLISEIELTWENMQLGAVQGVVLDADGSVIVDWYKEWEIAPPKPIDFKLNNETTNVADHV HHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHH DQVIMKMIEASKGAFSDRSRIIGLCGNEFFSKLKNHKTIRETYLNTALAQTLNSAGGVAT HHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC PSAIGSGSFGSFDFAGVTFINYRSIHNYNVSAKAGTKRAIGIKPDECQFLPANAPGVFQK CCCCCCCCCCCCCCCCEEEEEEEEEECCCEECCCCCCEECCCCCCCCEEEECCCCCCHHH TFAPGESLDFANTVGKPLYTMLIVDNDRNAWVKPEVYSYPLYICTRPEMLFKAVSGGK HCCCCCCCCHHHHCCCCEEEEEEEECCCCCEECCCCEECCEEEEECHHHHHHHHCCCC >Mature Secondary Structure MDMNFFKHDAFSATTMMKAIENYEFQPGLISSLNLFEEVETSTTVVGIERRDNTLSLIQT CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEE SERGAPLVEGDRDGRNLRFFKTTRIAKSDTVKSEEIQNRREFGTEDQLETAMKYIARKQK CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLISEIELTWENMQLGAVQGVVLDADGSVIVDWYKEWEIAPPKPIDFKLNNETTNVADHV HHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHH DQVIMKMIEASKGAFSDRSRIIGLCGNEFFSKLKNHKTIRETYLNTALAQTLNSAGGVAT HHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC PSAIGSGSFGSFDFAGVTFINYRSIHNYNVSAKAGTKRAIGIKPDECQFLPANAPGVFQK CCCCCCCCCCCCCCCCEEEEEEEEEECCCEECCCCCCEECCCCCCCCEEEECCCCCCHHH TFAPGESLDFANTVGKPLYTMLIVDNDRNAWVKPEVYSYPLYICTRPEMLFKAVSGGK HCCCCCCCCHHHHCCCCEEEEEEEECCCCCEECCCCEECCEEEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA