| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475127
Identifier: 49475127
GI number: 49475127
Start: 396469
End: 397227
Strand: Reverse
Name: 49475127
Synonym: BH03240
Alternate gene names: NA
Gene position: 397227-396469 (Counterclockwise)
Preceding gene: 49475128
Following gene: 49475126
Centisome position: 20.57
GC content: 41.5
Gene sequence:
>759_bases ATGGCACAATATTTAATCGACATATATCAAACCAGTATTGGTGGCGACACTGTTCAGACGGTAAATGCACGTGAATTACA TACGTTTTTGGAAATAGGAAAAGATTTCTCTACTTGGATTACTGACCGTATCAACAAATATAATTTATTAGAAAATCAAG ATTTTGTTTGCTCCCCGATTTTGGGGAGCAAAGGCAGAGGTGGTCACAATCGTAAAGATTATCATCTGACTTTAAGCGTA GCCAAAGAGCTCTCTATGCTTGAAAATAATAAGAAAGGTAGAGAAGCTCGTTTATACTTTATCGAATGTGAAAGACGGTT AAAACAAGTAGCAACACCACAGATAGCCCCTCCACAAGTTGATTACTCCAAACCCGAAGCATTACTTGGTGTCTTGAATC ACCTACAAAGTCAAATCGAGCAAAAAGACCATGTTATTGCAGAATTAGCACCAAAAGCAGAGGCTTTGGAAGGGTTAAAA CGTTCTGATGGTCTGTTTGGTTTAATTGAAGCGGCGAAGATGTTGGAGGTGCGACCAAAGGACTTAACCGATTACTTGCG CAAACATGACTGGGTCTATCGACGAGCTCCAGGGGCGCCTCTGTTACCTTATCAGGACAAGATCAAGAAAGGCTTTATGG ATTGCCCTGCTATCACCATTCAAAGACCGGATGGTACAGAAAAGGTGCTCCCTTCAACGAAAATCACCTCCAGAGGATTG GCATGCTTAAGAGAGCAAATCTTTGGGGGTGTACAATGA
Upstream 100 bases:
>100_bases TGGGAAAGGCATAACGACGGGCTATGTGCCGTGTTTTTCAGCACCCGGCGCTCTTCATAGAGTGTCAATGAAAAACCTTT AAGCACATAGGAGCCAAATC
Downstream 100 bases:
>100_bases AGATAGACACCAACTTCTTATGCGATTTGTGGATGGCATTATCTCAATTTTCTAAACATGAAAATATGAATGATAAAGAT TGTACTGCTCTGGTTGATAC
Product: anti-repressor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MAQYLIDIYQTSIGGDTVQTVNARELHTFLEIGKDFSTWITDRINKYNLLENQDFVCSPILGSKGRGGHNRKDYHLTLSV AKELSMLENNKKGREARLYFIECERRLKQVATPQIAPPQVDYSKPEALLGVLNHLQSQIEQKDHVIAELAPKAEALEGLK RSDGLFGLIEAAKMLEVRPKDLTDYLRKHDWVYRRAPGAPLLPYQDKIKKGFMDCPAITIQRPDGTEKVLPSTKITSRGL ACLREQIFGGVQ
Sequences:
>Translated_252_residues MAQYLIDIYQTSIGGDTVQTVNARELHTFLEIGKDFSTWITDRINKYNLLENQDFVCSPILGSKGRGGHNRKDYHLTLSV AKELSMLENNKKGREARLYFIECERRLKQVATPQIAPPQVDYSKPEALLGVLNHLQSQIEQKDHVIAELAPKAEALEGLK RSDGLFGLIEAAKMLEVRPKDLTDYLRKHDWVYRRAPGAPLLPYQDKIKKGFMDCPAITIQRPDGTEKVLPSTKITSRGL ACLREQIFGGVQ >Mature_251_residues AQYLIDIYQTSIGGDTVQTVNARELHTFLEIGKDFSTWITDRINKYNLLENQDFVCSPILGSKGRGGHNRKDYHLTLSVA KELSMLENNKKGREARLYFIECERRLKQVATPQIAPPQVDYSKPEALLGVLNHLQSQIEQKDHVIAELAPKAEALEGLKR SDGLFGLIEAAKMLEVRPKDLTDYLRKHDWVYRRAPGAPLLPYQDKIKKGFMDCPAITIQRPDGTEKVLPSTKITSRGLA CLREQIFGGVQ
Specific function: Unknown
COG id: COG3561
COG function: function code K; Phage anti-repressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013557 - InterPro: IPR018876 [H]
Pfam domain/function: PF08346 AntA; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 28505; Mature: 28374
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQYLIDIYQTSIGGDTVQTVNARELHTFLEIGKDFSTWITDRINKYNLLENQDFVCSPI CCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEECC LGSKGRGGHNRKDYHLTLSVAKELSMLENNKKGREARLYFIECERRLKQVATPQIAPPQV CCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCC DYSKPEALLGVLNHLQSQIEQKDHVIAELAPKAEALEGLKRSDGLFGLIEAAKMLEVRPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCH DLTDYLRKHDWVYRRAPGAPLLPYQDKIKKGFMDCPAITIQRPDGTEKVLPSTKITSRGL HHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCEEEEECCCCCHHCCCCCHHHHHHH ACLREQIFGGVQ HHHHHHHHCCCC >Mature Secondary Structure AQYLIDIYQTSIGGDTVQTVNARELHTFLEIGKDFSTWITDRINKYNLLENQDFVCSPI CHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEECC LGSKGRGGHNRKDYHLTLSVAKELSMLENNKKGREARLYFIECERRLKQVATPQIAPPQV CCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCC DYSKPEALLGVLNHLQSQIEQKDHVIAELAPKAEALEGLKRSDGLFGLIEAAKMLEVRPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCH DLTDYLRKHDWVYRRAPGAPLLPYQDKIKKGFMDCPAITIQRPDGTEKVLPSTKITSRGL HHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCEEEEECCCCCHHCCCCCHHHHHHH ACLREQIFGGVQ HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]