Click here to switch to the map view.

The map label for this gene is gpU

Identifier: 49475109

GI number: 49475109

Start: 380608

End: 380988

Strand: Reverse

Name: gpU

Synonym: BH03050

Alternate gene names: NA

Gene position: 380988-380608 (Counterclockwise)

Preceding gene: 49475110

Following gene: 49475108

Centisome position: 19.73

GC content: 41.73

Gene sequence:

>381_bases
ATGATGTTAGCTTTGGGTGGTTTTATTTTTTCCATTGAAACGGCCGCTTATCAAACCCTTGACATGTCTTATGGCATTCC
ATGGGTGGAGCAAGGGCGATTGGGGCGCAAAGCAGCACTTCAATTGCCTGCCGTTGCAAATGCGGAATTTTCTTTAACCG
GTGTGATCTATCCAGATTTTAAAGGCGGTCACGGACAAATCGAGTATTTGCGACAAATGGCACATAATGGTCCTCATATC
CTTGTGACGGGTCAGGGGAAAATTTTAGGAAAGTTTGTCATTCTTTCTGTAGAGGAAAAACAAAGCATTTTTCACCAAAA
TGGGACCCCCAAAAAACAAGAATTTACAATAAAGTTGAGAGAATATGGTGAAGAGCTATGA

Upstream 100 bases:

>100_bases
GTTTAAAGGACGAAATCCGCGCCGCTGTCAATCAAGCCCTTGAACGCTATGCCAAACAGCAACGCTTGGCTATCGCCTCT
AGCCTTTCGGATTAAACATC

Downstream 100 bases:

>100_bases
GTGATCTTTACGTGACAAAAGAAGGCGATATGGTTGATGCCATTTGCTGGAGATACTATGCCAAGGGTCAACAAGCCCTT
GCTGTTGAACGCGTTTATGC

Product: Phage tail protein

Products: NA

Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Phage Tail Protein U; Tail Fiber Protein; Pyocin R2_PP Tail Formation Protein; Bacteriophage Tail Fiber Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Pyocin R2_PP Tail Formation Protein GpU; Bacteriophage P2 Tail Protein GPU; Phage-Related Protein; Phage Tail; Tail Protein U

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MMLALGGFIFSIETAAYQTLDMSYGIPWVEQGRLGRKAALQLPAVANAEFSLTGVIYPDFKGGHGQIEYLRQMAHNGPHI
LVTGQGKILGKFVILSVEEKQSIFHQNGTPKKQEFTIKLREYGEEL

Sequences:

>Translated_126_residues
MMLALGGFIFSIETAAYQTLDMSYGIPWVEQGRLGRKAALQLPAVANAEFSLTGVIYPDFKGGHGQIEYLRQMAHNGPHI
LVTGQGKILGKFVILSVEEKQSIFHQNGTPKKQEFTIKLREYGEEL
>Mature_126_residues
MMLALGGFIFSIETAAYQTLDMSYGIPWVEQGRLGRKAALQLPAVANAEFSLTGVIYPDFKGGHGQIEYLRQMAHNGPHI
LVTGQGKILGKFVILSVEEKQSIFHQNGTPKKQEFTIKLREYGEEL

Specific function: Unknown

COG id: COG3499

COG function: function code R; Phage protein U

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14011; Mature: 14011

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLALGGFIFSIETAAYQTLDMSYGIPWVEQGRLGRKAALQLPAVANAEFSLTGVIYPDF
CEEEECCEEEEEECHHEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCC
KGGHGQIEYLRQMAHNGPHILVTGQGKILGKFVILSVEEKQSIFHQNGTPKKQEFTIKLR
CCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEHHHHHHHHCCCCCCCCEEEEEEH
EYGEEL
HCCCCC
>Mature Secondary Structure
MMLALGGFIFSIETAAYQTLDMSYGIPWVEQGRLGRKAALQLPAVANAEFSLTGVIYPDF
CEEEECCEEEEEECHHEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCC
KGGHGQIEYLRQMAHNGPHILVTGQGKILGKFVILSVEEKQSIFHQNGTPKKQEFTIKLR
CCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEHHHHHHHHCCCCCCCCEEEEEEH
EYGEEL
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA