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The map label for this gene is yfhC [C]

Identifier: 49475071

GI number: 49475071

Start: 341883

End: 342329

Strand: Reverse

Name: yfhC [C]

Synonym: BH02600

Alternate gene names: 49475071

Gene position: 342329-341883 (Counterclockwise)

Preceding gene: 49475079

Following gene: 49475053

Centisome position: 17.73

GC content: 44.07

Gene sequence:

>447_bases
ATGACTTTAACTCCCATGGAAATAGCCCTGTTAGAAGCACAATGGGCAGCAAAAAAAGATGAAGTCCCTGTAGGCGCAGT
TATCACCCGCGGTCAATCAATTATTGTACGTGCTGGGAACTCTATAAAAGCCGCATATGATCCTACAGGACACGCAGAAA
TCCGCGTTATCCGTATGGCTTGCGCAGCATTCCAAAGCGAAAGACTTCCTGATTGTGACCTTTATGTAACGCTCGAACCT
TGTGCTATGTGTGCTGCAGCCATTTCATTTGCACGCATACGACGTCTCTACTATGCAACAAGTGATCCAAAAGGTGGTGC
TATTGAACATGGACCGCGTCTTTATAAGCAATCAACATGTCATCACAGTCCTGAGGTCTATTCTGGTTTCAAGGAAAAAG
AAGCCGCACAATTACTTAAAGATTTTTTTGCTCAAAAGCGGTGTTAA

Upstream 100 bases:

>100_bases
CCTTTGTTAAATAAGAAAGAGCTCATTTACTTCACAGCACACCTCTCTATGAATAGAAGAAGCCTTTTGGCTCTCTAAAC
TTTAAAGTAGAAAGAACAGT

Downstream 100 bases:

>100_bases
GGATGATTTCTCTTTTTATCTCCAAAACTGACCTTTAACAAGATGAGTTCTCTTTTAAAAGATCACAAACTCTTCTTATC
AGATCGCATTTTCGAAGTAT

Product: nitrogen fixation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTLTPMEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQSERLPDCDLYVTLEP
CAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPEVYSGFKEKEAAQLLKDFFAQKRC

Sequences:

>Translated_148_residues
MTLTPMEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQSERLPDCDLYVTLEP
CAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPEVYSGFKEKEAAQLLKDFFAQKRC
>Mature_147_residues
TLTPMEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQSERLPDCDLYVTLEPC
AMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPEVYSGFKEKEAAQLLKDFFAQKRC

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=142, Percent_Identity=39.4366197183099, Blast_Score=99, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17554608, Length=113, Percent_Identity=31.858407079646, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17541138, Length=147, Percent_Identity=29.9319727891156, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355527, Length=144, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16350; Mature: 16219

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPMEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMA
CCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCHHHHHHHH
CAAFQSERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTC
HHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCC
HHSPEVYSGFKEKEAAQLLKDFFAQKRC
CCCCHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLTPMEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMA
CCCCHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCHHHHHHHH
CAAFQSERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTC
HHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCC
HHSPEVYSGFKEKEAAQLLKDFFAQKRC
CCCCHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA