| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is pheA [H]
Identifier: 49475047
GI number: 49475047
Start: 311766
End: 312629
Strand: Reverse
Name: pheA [H]
Synonym: BH02350
Alternate gene names: 49475047
Gene position: 312629-311766 (Counterclockwise)
Preceding gene: 49475048
Following gene: 49475045
Centisome position: 16.19
GC content: 39.24
Gene sequence:
>864_bases ATGAAGATACTAAAAAAAACCAATAAAATCTCATTCCAAGGAGAATATGGCGCTAATTCCCATATCGCCTGTACTAATAT GTTTCCCAATATGGATGCTCTACCCTCAACAACTTTTGAAGACGCGCTTAACTTAGTGGAAAATGGACAAGCTGATCTTG CTATGATTCCTATTGAAAATACTCTTGCTGGCCGCGTTGCCGATATTCATCACCTTTTACCACAATCATCTCTCTATATT ATTGATGAATATTTTTTGCCTATTCATTTTCAATTAATGGTTTTACCCGGCGTTACACATAAAGAAATTGAAACCGTTCA TAGTCATGCGCATGCCCTTGCACAATGCCGTAAAATCATTCGTAATAATGGCTGGCAACCTGTAACTTCTGCTGATACAG CTGGAGCTGCAAAATTTATTAAAAAAAACGGAAAGCGTTCACAAGCAGCCTTAGCACCTCTGATCGCAGCGGAACTCTAT GGACTTGATATTCTTGAAAAAAATGTTGAAGATAGCCCTCATAATATTACCCGTTTTGTCATCCTTTCACGTTCTCAACG GCACGTGCCCAAACCCCAAAATGGCGAAAAAATTATCACTAGCCTTCTTTTTCGAGTCCGCAATGTCCCAGCTGCTCTTT ATAAAGCTATGGGAGGATTTGCCACAAACGGTATCAATATGACAAAATTAGAAAGCTACCAAATTGGTGGCAATTTCAAT GCAACACAATTTTTTGTTGATATCGAAGGGCATCCTGAAGACCCCATGATGCAACTTGCCTTAGATGAGCTGTCCTTCTT TTCTGCTGAATTGCGCATTATTGGCATTTATCCTGCTAAAAATGGTCGAAGATCACACATATAA
Upstream 100 bases:
>100_bases CACTAGAGCATAATATGCGTATCGATGTAGAGATAGTCGATACAATTCCCTTAGGGGTCGATACACAACGTGATCTTGAA AGGGTACGCAAGATTTTAGC
Downstream 100 bases:
>100_bases AAATTAATTAAATTGTACATTTCTCGTGGAGATTGAAGGGCATACTAAAGATCTCACGATACAACGCCCCTTGAAAAACA GCGGCTTTCTTTTCTGCTAA
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKILKKTNKISFQGEYGANSHIACTNMFPNMDALPSTTFEDALNLVENGQADLAMIPIENTLAGRVADIHHLLPQSSLYI IDEYFLPIHFQLMVLPGVTHKEIETVHSHAHALAQCRKIIRNNGWQPVTSADTAGAAKFIKKNGKRSQAALAPLIAAELY GLDILEKNVEDSPHNITRFVILSRSQRHVPKPQNGEKIITSLLFRVRNVPAALYKAMGGFATNGINMTKLESYQIGGNFN ATQFFVDIEGHPEDPMMQLALDELSFFSAELRIIGIYPAKNGRRSHI
Sequences:
>Translated_287_residues MKILKKTNKISFQGEYGANSHIACTNMFPNMDALPSTTFEDALNLVENGQADLAMIPIENTLAGRVADIHHLLPQSSLYI IDEYFLPIHFQLMVLPGVTHKEIETVHSHAHALAQCRKIIRNNGWQPVTSADTAGAAKFIKKNGKRSQAALAPLIAAELY GLDILEKNVEDSPHNITRFVILSRSQRHVPKPQNGEKIITSLLFRVRNVPAALYKAMGGFATNGINMTKLESYQIGGNFN ATQFFVDIEGHPEDPMMQLALDELSFFSAELRIIGIYPAKNGRRSHI >Mature_287_residues MKILKKTNKISFQGEYGANSHIACTNMFPNMDALPSTTFEDALNLVENGQADLAMIPIENTLAGRVADIHHLLPQSSLYI IDEYFLPIHFQLMVLPGVTHKEIETVHSHAHALAQCRKIIRNNGWQPVTSADTAGAAKFIKKNGKRSQAALAPLIAAELY GLDILEKNVEDSPHNITRFVILSRSQRHVPKPQNGEKIITSLLFRVRNVPAALYKAMGGFATNGINMTKLESYQIGGNFN ATQFFVDIEGHPEDPMMQLALDELSFFSAELRIIGIYPAKNGRRSHI
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=285, Percent_Identity=32.9824561403509, Blast_Score=139, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 31872; Mature: 31872
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00857 PREPHENATE_DEHYDR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKKTNKISFQGEYGANSHIACTNMFPNMDALPSTTFEDALNLVENGQADLAMIPIEN CCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC TLAGRVADIHHLLPQSSLYIIDEYFLPIHFQLMVLPGVTHKEIETVHSHAHALAQCRKII HHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH RNNGWQPVTSADTAGAAKFIKKNGKRSQAALAPLIAAELYGLDILEKNVEDSPHNITRFV HCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE ILSRSQRHVPKPQNGEKIITSLLFRVRNVPAALYKAMGGFATNGINMTKLESYQIGGNFN EEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC ATQFFVDIEGHPEDPMMQLALDELSFFSAELRIIGIYPAKNGRRSHI CEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MKILKKTNKISFQGEYGANSHIACTNMFPNMDALPSTTFEDALNLVENGQADLAMIPIEN CCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC TLAGRVADIHHLLPQSSLYIIDEYFLPIHFQLMVLPGVTHKEIETVHSHAHALAQCRKII HHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH RNNGWQPVTSADTAGAAKFIKKNGKRSQAALAPLIAAELYGLDILEKNVEDSPHNITRFV HCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE ILSRSQRHVPKPQNGEKIITSLLFRVRNVPAALYKAMGGFATNGINMTKLESYQIGGNFN EEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC ATQFFVDIEGHPEDPMMQLALDELSFFSAELRIIGIYPAKNGRRSHI CEEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512561; 1444388 [H]