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The map label for this gene is 49474881

Identifier: 49474881

GI number: 49474881

Start: 80379

End: 80918

Strand: Reverse

Name: 49474881

Synonym: BH00570

Alternate gene names: NA

Gene position: 80918-80379 (Counterclockwise)

Preceding gene: 49474882

Following gene: 49474878

Centisome position: 4.19

GC content: 38.33

Gene sequence:

>540_bases
ATGTATCGTCTTTTTAGTGCCCTTCAGATTCCTCAAAAAACAACTCAAGAACTCATATCGCTGCAAAATGGCTTACCAAA
AGCACAATGGATTAACCCACAAAACTTTCATATCACTTTGTCTTTTTTTGGTGAGATTGAAAGCTTACTCGCAGATGAAC
TGATACGTGCCTTTGACACAATAAAGCTTCCTCCTTTTGTCCTACACATAAAGAGTTTTGAAATTTTTAGTTCAGAAAAT
ACGCCACATTCTCTTGTTGTCCGTATTGAGCCTTGTGAAACTCTCAACCTTTTACACAAAAAGATGCAGTGTATTCGCAA
TCACCTAAGATTACCTCCTGATGAAAGACAATTTACTCCGCATATCACTCTTGCTAGGCTGCTCGATATTCAACCTGAAG
ATCTTTCTTACTATCTGTCTTCTCGAAGTAATTTTTCGTTCCCCCCCTTTGAGGTAAACAATTTTGTTTTATTGTTATCG
CCCTCTCCCTCAAGCAATGCTCCTTATATCGTAAAAGGAAGCTGGAGACTTCAAGGGTAA

Upstream 100 bases:

>100_bases
GGCTTTTCTTTTTCTATACCATTACACTATTGGTAGTGCTATATTAATCTTCAACTTCTCAACCATTACGCTTCAGTGGC
ATCTTTTTTTAAGGAAAACT

Downstream 100 bases:

>100_bases
AAGGGCGTTCTTCCACCCTTTAGAACTCTCTTTTATAAAACGCCTCTTTATAAAACGCCTCACGAAAGTGGAAAAGTTAC
ATATGTTGCCATATTTTGAG

Product: ABC transporter (permease)

Products: NA

Alternate protein names: 2 5' RNA Ligase; ABC Transporter; ABC Transporter Permease

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYRLFSALQIPQKTTQELISLQNGLPKAQWINPQNFHITLSFFGEIESLLADELIRAFDTIKLPPFVLHIKSFEIFSSEN
TPHSLVVRIEPCETLNLLHKKMQCIRNHLRLPPDERQFTPHITLARLLDIQPEDLSYYLSSRSNFSFPPFEVNNFVLLLS
PSPSSNAPYIVKGSWRLQG

Sequences:

>Translated_179_residues
MYRLFSALQIPQKTTQELISLQNGLPKAQWINPQNFHITLSFFGEIESLLADELIRAFDTIKLPPFVLHIKSFEIFSSEN
TPHSLVVRIEPCETLNLLHKKMQCIRNHLRLPPDERQFTPHITLARLLDIQPEDLSYYLSSRSNFSFPPFEVNNFVLLLS
PSPSSNAPYIVKGSWRLQG
>Mature_179_residues
MYRLFSALQIPQKTTQELISLQNGLPKAQWINPQNFHITLSFFGEIESLLADELIRAFDTIKLPPFVLHIKSFEIFSSEN
TPHSLVVRIEPCETLNLLHKKMQCIRNHLRLPPDERQFTPHITLARLLDIQPEDLSYYLSSRSNFSFPPFEVNNFVLLLS
PSPSSNAPYIVKGSWRLQG

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20675; Mature: 20675

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLFSALQIPQKTTQELISLQNGLPKAQWINPQNFHITLSFFGEIESLLADELIRAFDT
CCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHC
IKLPPFVLHIKSFEIFSSENTPHSLVVRIEPCETLNLLHKKMQCIRNHLRLPPDERQFTP
CCCCCEEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HITLARLLDIQPEDLSYYLSSRSNFSFPPFEVNNFVLLLSPSPSSNAPYIVKGSWRLQG
CHHHHHHHCCCCCHHHHEECCCCCCCCCCEECCCEEEEECCCCCCCCCEEEECCEEECC
>Mature Secondary Structure
MYRLFSALQIPQKTTQELISLQNGLPKAQWINPQNFHITLSFFGEIESLLADELIRAFDT
CCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHC
IKLPPFVLHIKSFEIFSSENTPHSLVVRIEPCETLNLLHKKMQCIRNHLRLPPDERQFTP
CCCCCEEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HITLARLLDIQPEDLSYYLSSRSNFSFPPFEVNNFVLLLSPSPSSNAPYIVKGSWRLQG
CHHHHHHHCCCCCHHHHEECCCCCCCCCCEECCCEEEEECCCCCCCCCEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA