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The map label for this gene is yufP [H]

Identifier: 49186639

GI number: 49186639

Start: 3601091

End: 3601840

Strand: Reverse

Name: yufP [H]

Synonym: BAS3639

Alternate gene names: 49186639

Gene position: 3601840-3601091 (Counterclockwise)

Preceding gene: 49186640

Following gene: 49186638

Centisome position: 68.89

GC content: 38.67

Gene sequence:

>750_bases
GTGTCGTTACCAGCAATTTTGCATATTCCGCTATCTATTTTAGTGGCGGCAATTGCCGGCGGTTTATGGGGGTTTATACC
CGGATATTTAAAAGGAAAGCTTAAAGTAAATGAAGTAATTGTTACAATTATGATGAACTACATTGCACTTTATGTTACGT
ATGACCTTATTAAACGTTTTATTCATGAAGGTAATGAGAAGTCTTATGATGTACAAGCAAGTGCTTCGTTAGCTTCTGAG
TGGTTATCTTCATTGACAGATGGATCGCGTTTGCACTGGGGGATTGTTGTAGCTATTATCGTTGCAATTGTAATGTGGTT
CTTATTAGATAGAACAACGTTAGGGTATGAATTAAAGTCGGTTGGTTTTAACCAAAATGCCTCTCAATATGCAGGGATGA
AAGTATCGCGTAATGTTGTATTATCAATGACAATTGCTGGTGCTTTTGCTGGAATTGGTGGAGCTATGGAAGGATTAGGG
GCATTCCAAAGTATGACGGCGATGTCGTCGTTTACTGGTATCGGATTTGATGGGATTGCGGTAGCGCTTCTAGGAGGAAA
TAATCCATTTGGTATATTATTAGCAGCTTTACTGTTCGGTGGTTTGAAAAGTGCAGCTCCACAAATGAATTTTGAAGCAG
ATGTACCTTCTGAGTTAATTAACGTTATTATTGCATGTATTATTTTCTTTGTTGCGTGCAGTTATGTTTTACGCTGGGCA
CTTACACGCATGAGCAAGGAGGGAAAATAA

Upstream 100 bases:

>100_bases
TCTCTCAGTAGCATTTGCATTTCGTACAGGTCTTTTCAATATTGGGGTGGAAGGACAGTTATTAGTTGGGTAGCTCGCTG
CTGTTTGGTTTGGATATGCA

Downstream 100 bases:

>100_bases
ATGAGCTTTTTAGATATTTTAGCCATTCTTGTGACGGGTACGTTATATACGGCAGCGCCACTTATTTTACGGCGTTAGGT
GGAGTGTTCAGTGAACGTTC

Product: branched-chain amino acid transport system, permease, N-terminus

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSLPAILHIPLSILVAAIAGGLWGFIPGYLKGKLKVNEVIVTIMMNYIALYVTYDLIKRFIHEGNEKSYDVQASASLASE
WLSSLTDGSRLHWGIVVAIIVAIVMWFLLDRTTLGYELKSVGFNQNASQYAGMKVSRNVVLSMTIAGAFAGIGGAMEGLG
AFQSMTAMSSFTGIGFDGIAVALLGGNNPFGILLAALLFGGLKSAAPQMNFEADVPSELINVIIACIIFFVACSYVLRWA
LTRMSKEGK

Sequences:

>Translated_249_residues
MSLPAILHIPLSILVAAIAGGLWGFIPGYLKGKLKVNEVIVTIMMNYIALYVTYDLIKRFIHEGNEKSYDVQASASLASE
WLSSLTDGSRLHWGIVVAIIVAIVMWFLLDRTTLGYELKSVGFNQNASQYAGMKVSRNVVLSMTIAGAFAGIGGAMEGLG
AFQSMTAMSSFTGIGFDGIAVALLGGNNPFGILLAALLFGGLKSAAPQMNFEADVPSELINVIIACIIFFVACSYVLRWA
LTRMSKEGK
>Mature_248_residues
SLPAILHIPLSILVAAIAGGLWGFIPGYLKGKLKVNEVIVTIMMNYIALYVTYDLIKRFIHEGNEKSYDVQASASLASEW
LSSLTDGSRLHWGIVVAIIVAIVMWFLLDRTTLGYELKSVGFNQNASQYAGMKVSRNVVLSMTIAGAFAGIGGAMEGLGA
FQSMTAMSSFTGIGFDGIAVALLGGNNPFGILLAALLFGGLKSAAPQMNFEADVPSELINVIIACIIFFVACSYVLRWAL
TRMSKEGK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 26671; Mature: 26540

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPAILHIPLSILVAAIAGGLWGFIPGYLKGKLKVNEVIVTIMMNYIALYVTYDLIKRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHEGNEKSYDVQASASLASEWLSSLTDGSRLHWGIVVAIIVAIVMWFLLDRTTLGYELKS
HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VGFNQNASQYAGMKVSRNVVLSMTIAGAFAGIGGAMEGLGAFQSMTAMSSFTGIGFDGIA
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHE
VALLGGNNPFGILLAALLFGGLKSAAPQMNFEADVPSELINVIIACIIFFVACSYVLRWA
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTRMSKEGK
HHHHHCCCC
>Mature Secondary Structure 
SLPAILHIPLSILVAAIAGGLWGFIPGYLKGKLKVNEVIVTIMMNYIALYVTYDLIKRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHEGNEKSYDVQASASLASEWLSSLTDGSRLHWGIVVAIIVAIVMWFLLDRTTLGYELKS
HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VGFNQNASQYAGMKVSRNVVLSMTIAGAFAGIGGAMEGLGAFQSMTAMSSFTGIGFDGIA
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHE
VALLGGNNPFGILLAALLFGGLKSAAPQMNFEADVPSELINVIIACIIFFVACSYVLRWA
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTRMSKEGK
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]