Click here to switch to the map view.

The map label for this gene is yufQ [H]

Identifier: 49186638

GI number: 49186638

Start: 3600132

End: 3601166

Strand: Reverse

Name: yufQ [H]

Synonym: BAS3638

Alternate gene names: 49186638

Gene position: 3601166-3600132 (Counterclockwise)

Preceding gene: 49186639

Following gene: 49186637

Centisome position: 68.87

GC content: 39.81

Gene sequence:

>1035_bases
ATGTATTATTTTCTTTGTTGCGTGCAGTTATGTTTTACGCTGGGCACTTACACGCATGAGCAAGGAGGGAAAATAAATGA
GCTTTTTAGATATTTTAGCCATTCTTGTGACGGGTACGTTATATACGGCAGCGCCACTTATTTTACGGCGTTAGGTGGAG
TGTTCAGTGAACGTTCTGGAGTTGTAAATATAGCGTTAGAAGGTTTAATGTTATTTGGTGCATTTATTGGTATTGTTACA
ACGTTATTAATGGGTGATACGCGGGGATCGATGACTCCTTGGATTGCGCTATTATTTGCAGCGATTGGTAGTGGCTTATT
TGCACTTCTTCACGCAGTAGCATCTATTACATTCCGCGCAGATCAAGTAGTGAGCGGGGTAGCGATTAACTTCTTAGCTC
TTGGTTTAACAGTATTTGCGATTAAGAAAATCTTTGGCAAAGGACAAACTGATTTCATTCAATACCGTATTGAAAAAATC
GATGTTCCGGGTCTTTCGGATATTCCAGTAATCGGAAAAATCTTTTTCTCAAATGTACCGTTAACATCGTATATTGCTAT
TATTTTAGCGTTTGTCGTTTGGTATGTCATTTATAAAACGCCGTTTGGCCTTCGTCTTCGTGCGGTTGGAGAACATCCAA
TGGCAGCAGATACGATGGGGATCAATGTATATAAAATGCGTTATATTGCAGTTGCTATATCTGGAATGTTTGCCGGAGTT
GGTGGAGCAGTCTTCGCTATGTCGATTTCTGGTAATTTCTCGGGTGCTACAATTACGGGACAAGGTTTCTTAGCACTAGC
AGCTATGATTTTTGGTAAATGGAATCCACTTGGTGCTCTTGGAGCCGCTCTGTTCTTCGGGTTTGCTCAATCACTAGGAA
TAACAGGTGGTACAATCCCTGTACTAAAAGAAATTCCAAGTGTATTCTTAACAATATTACCATATGTATTCACAATATTA
GCACTTGTTGGTTTTGTAGGTCGTTCTGAAGCTCCGAAAGCATTAGGAACTCCTTATGAAAAAGGAAAACGATAA

Upstream 100 bases:

>100_bases
TATTATTAGCAGCTTTACTGTTCGGTGGTTTGAAAAGTGCAGCTCCACAAATGAATTTTGAAGCAGATGTACCTTCTGAG
TTAATTAACGTTATTATTGC

Downstream 100 bases:

>100_bases
GTATAAAAAAGCTCGCACATTAGTGCGGGCTTTTTTACATAGACTATATTTAATACGGAATTTTACTATGTTCCTTACAT
ATTACAGTTTTTAGAAAGGG

Product: branched-chain amino acid transport system, permease component, C-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MYYFLCCVQLCFTLGTYTHEQGGKINELFRYFSHSCDGYVIYGSATYFTALGGVFSERSGVVNIALEGLMLFGAFIGIVT
TLLMGDTRGSMTPWIALLFAAIGSGLFALLHAVASITFRADQVVSGVAINFLALGLTVFAIKKIFGKGQTDFIQYRIEKI
DVPGLSDIPVIGKIFFSNVPLTSYIAIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIAVAISGMFAGV
GGAVFAMSISGNFSGATITGQGFLALAAMIFGKWNPLGALGAALFFGFAQSLGITGGTIPVLKEIPSVFLTILPYVFTIL
ALVGFVGRSEAPKALGTPYEKGKR

Sequences:

>Translated_344_residues
MYYFLCCVQLCFTLGTYTHEQGGKINELFRYFSHSCDGYVIYGSATYFTALGGVFSERSGVVNIALEGLMLFGAFIGIVT
TLLMGDTRGSMTPWIALLFAAIGSGLFALLHAVASITFRADQVVSGVAINFLALGLTVFAIKKIFGKGQTDFIQYRIEKI
DVPGLSDIPVIGKIFFSNVPLTSYIAIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIAVAISGMFAGV
GGAVFAMSISGNFSGATITGQGFLALAAMIFGKWNPLGALGAALFFGFAQSLGITGGTIPVLKEIPSVFLTILPYVFTIL
ALVGFVGRSEAPKALGTPYEKGKR
>Mature_344_residues
MYYFLCCVQLCFTLGTYTHEQGGKINELFRYFSHSCDGYVIYGSATYFTALGGVFSERSGVVNIALEGLMLFGAFIGIVT
TLLMGDTRGSMTPWIALLFAAIGSGLFALLHAVASITFRADQVVSGVAINFLALGLTVFAIKKIFGKGQTDFIQYRIEKI
DVPGLSDIPVIGKIFFSNVPLTSYIAIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIAVAISGMFAGV
GGAVFAMSISGNFSGATITGQGFLALAAMIFGKWNPLGALGAALFFGFAQSLGITGGTIPVLKEIPSVFLTILPYVFTIL
ALVGFVGRSEAPKALGTPYEKGKR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36848; Mature: 36848

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYFLCCVQLCFTLGTYTHEQGGKINELFRYFSHSCDGYVIYGSATYFTALGGVFSERSG
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCC
VVNIALEGLMLFGAFIGIVTTLLMGDTRGSMTPWIALLFAAIGSGLFALLHAVASITFRA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQVVSGVAINFLALGLTVFAIKKIFGKGQTDFIQYRIEKIDVPGLSDIPVIGKIFFSNVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
LTSYIAIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIAVAISGMFAGV
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCC
GGAVFAMSISGNFSGATITGQGFLALAAMIFGKWNPLGALGAALFFGFAQSLGITGGTIP
CCEEEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
VLKEIPSVFLTILPYVFTILALVGFVGRSEAPKALGTPYEKGKR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHCCCC
>Mature Secondary Structure
MYYFLCCVQLCFTLGTYTHEQGGKINELFRYFSHSCDGYVIYGSATYFTALGGVFSERSG
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCC
VVNIALEGLMLFGAFIGIVTTLLMGDTRGSMTPWIALLFAAIGSGLFALLHAVASITFRA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQVVSGVAINFLALGLTVFAIKKIFGKGQTDFIQYRIEKIDVPGLSDIPVIGKIFFSNVP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
LTSYIAIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIAVAISGMFAGV
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCC
GGAVFAMSISGNFSGATITGQGFLALAAMIFGKWNPLGALGAALFFGFAQSLGITGGTIP
CCEEEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
VLKEIPSVFLTILPYVFTILALVGFVGRSEAPKALGTPYEKGKR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]