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The map label for this gene is rapI [H]

Identifier: 49186487

GI number: 49186487

Start: 3457755

End: 3458843

Strand: Reverse

Name: rapI [H]

Synonym: BAS3484

Alternate gene names: 49186487

Gene position: 3458843-3457755 (Counterclockwise)

Preceding gene: 49186488

Following gene: 49186486

Centisome position: 66.15

GC content: 30.12

Gene sequence:

>1089_bases
ATGGAGACAAAAATTTCTATTACTAGTAAGGGTTATGAACTATTAGAAGAATGGTATCATGAAATGCTTGCTCAGCATAT
AGAGAAGGCAAGTATTTTAAAAATTGAAGCAGATAATATATTTAATAAGGTTAAAGAAAATACAGACTCTTTTATTTATT
ACTCTCTGTTAAGATTCAGGTATCAAATGTTAAAGGGGAATTTTGAAAAAGGGCTAGAAGGGCTAGAATACATAAAAGGT
ATGCCAGATGGTTTACTAAAATATTACTATCACTTCTTTAAATTTATTTATGCAACAGAAGTTGGAAACTACAATAGTGC
AGAAAAACATCTTGAATCTGCAAGTGATTTATTAGATATGATGTCCGATGAAAAAGAAAAAGCAGAGTACAATTATCGTG
TTGCGCTATATAAATATTATATTTCACAACCTACTTTAGCTATTAATTATGCTACAAAGGCTCTCGATTATTTTTCAAGC
CATGAAGGCTATGAGACTAAAAAAGGAGCGTGTGAAAATACATTAGGTATGGCTTGTATTACTTTAGAACAATTTGAATT
AGCTGAGGAATATCTAATTTCTGCTTTAAATATGTTTCAAAAACTTGATGAACAATCGCTAGTTTTAAAAGTTCGTAGTA
ATTTAGGAGTACTGTATGCCGAACAAAATTTATCAGATTCAGCTATACGTCATTTAGAAGAAGTATATAAAGCGTGTCAA
CATACAAAATTGCATTATCAAAGAAGGGTATTATTCCTATTAGCTCGAGAACATATTAAATTAAAACAGCATAATGATGC
AACTTTTTATATTAAAGAGGGCTTGAAGGATTGTAATCAAGAATATAGTTATCACTTAAATATTTTGGAGTGTATAAATA
ATAATGAATCTATAGAGAAGTTAGAGGAAATTGTAAATGAATCACTTTCGTATTTTCAAGAACAAGAATTGTGGAAAGAC
ATTCAAATTTATACCGAACTACTAGCAGGGAAATGGTATAATGTGGGTGCAAAGGAAAAGGCGTGTGAGTATTATCGTTT
AGGTCATGAAGCGAGAACTTTATTAAAAGAAAAGGGGCGTTTAAAATGA

Upstream 100 bases:

>100_bases
GATATATTTTTATCAATAAATAGTAATTGCTATAATCTACGCTTCCATATGATGATTTGTTATAATATTTAGATAATACT
CTTCGAAAAGGGGGATTTAT

Downstream 100 bases:

>100_bases
AAAAGATTAAAATTACATTAATGGGTTTAATCGGTATTGCAGTATTATCGTTTGGTTTAAATAGTCCTAGTATTGAAAAA
AGTGCAGCACCTACACTGAA

Product: prophage LambdaBa01 TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
METKISITSKGYELLEEWYHEMLAQHIEKASILKIEADNIFNKVKENTDSFIYYSLLRFRYQMLKGNFEKGLEGLEYIKG
MPDGLLKYYYHFFKFIYATEVGNYNSAEKHLESASDLLDMMSDEKEKAEYNYRVALYKYYISQPTLAINYATKALDYFSS
HEGYETKKGACENTLGMACITLEQFELAEEYLISALNMFQKLDEQSLVLKVRSNLGVLYAEQNLSDSAIRHLEEVYKACQ
HTKLHYQRRVLFLLAREHIKLKQHNDATFYIKEGLKDCNQEYSYHLNILECINNNESIEKLEEIVNESLSYFQEQELWKD
IQIYTELLAGKWYNVGAKEKACEYYRLGHEARTLLKEKGRLK

Sequences:

>Translated_362_residues
METKISITSKGYELLEEWYHEMLAQHIEKASILKIEADNIFNKVKENTDSFIYYSLLRFRYQMLKGNFEKGLEGLEYIKG
MPDGLLKYYYHFFKFIYATEVGNYNSAEKHLESASDLLDMMSDEKEKAEYNYRVALYKYYISQPTLAINYATKALDYFSS
HEGYETKKGACENTLGMACITLEQFELAEEYLISALNMFQKLDEQSLVLKVRSNLGVLYAEQNLSDSAIRHLEEVYKACQ
HTKLHYQRRVLFLLAREHIKLKQHNDATFYIKEGLKDCNQEYSYHLNILECINNNESIEKLEEIVNESLSYFQEQELWKD
IQIYTELLAGKWYNVGAKEKACEYYRLGHEARTLLKEKGRLK
>Mature_362_residues
METKISITSKGYELLEEWYHEMLAQHIEKASILKIEADNIFNKVKENTDSFIYYSLLRFRYQMLKGNFEKGLEGLEYIKG
MPDGLLKYYYHFFKFIYATEVGNYNSAEKHLESASDLLDMMSDEKEKAEYNYRVALYKYYISQPTLAINYATKALDYFSS
HEGYETKKGACENTLGMACITLEQFELAEEYLISALNMFQKLDEQSLVLKVRSNLGVLYAEQNLSDSAIRHLEEVYKACQ
HTKLHYQRRVLFLLAREHIKLKQHNDATFYIKEGLKDCNQEYSYHLNILECINNNESIEKLEEIVNESLSYFQEQELWKD
IQIYTELLAGKWYNVGAKEKACEYYRLGHEARTLLKEKGRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 42719; Mature: 42719

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKISITSKGYELLEEWYHEMLAQHIEKASILKIEADNIFNKVKENTDSFIYYSLLRFR
CCCEEEECHHHHHHHHHHHHHHHHHHHCHHHEEEEEHHHHHHHHHHCCCHHHHHHHHHHH
YQMLKGNFEKGLEGLEYIKGMPDGLLKYYYHFFKFIYATEVGNYNSAEKHLESASDLLDM
HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MSDEKEKAEYNYRVALYKYYISQPTLAINYATKALDYFSSHEGYETKKGACENTLGMACI
HHCCHHHHHCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
TLEQFELAEEYLISALNMFQKLDEQSLVLKVRSNLGVLYAEQNLSDSAIRHLEEVYKACQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
HTKLHYQRRVLFLLAREHIKLKQHNDATFYIKEGLKDCNQEYSYHLNILECINNNESIEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LEEIVNESLSYFQEQELWKDIQIYTELLAGKWYNVGAKEKACEYYRLGHEARTLLKEKGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LK
CC
>Mature Secondary Structure
METKISITSKGYELLEEWYHEMLAQHIEKASILKIEADNIFNKVKENTDSFIYYSLLRFR
CCCEEEECHHHHHHHHHHHHHHHHHHHCHHHEEEEEHHHHHHHHHHCCCHHHHHHHHHHH
YQMLKGNFEKGLEGLEYIKGMPDGLLKYYYHFFKFIYATEVGNYNSAEKHLESASDLLDM
HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MSDEKEKAEYNYRVALYKYYISQPTLAINYATKALDYFSSHEGYETKKGACENTLGMACI
HHCCHHHHHCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
TLEQFELAEEYLISALNMFQKLDEQSLVLKVRSNLGVLYAEQNLSDSAIRHLEEVYKACQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
HTKLHYQRRVLFLLAREHIKLKQHNDATFYIKEGLKDCNQEYSYHLNILECINNNESIEK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LEEIVNESLSYFQEQELWKDIQIYTELLAGKWYNVGAKEKACEYYRLGHEARTLLKEKGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]