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The map label for this gene is 49186430

Identifier: 49186430

GI number: 49186430

Start: 3398219

End: 3398647

Strand: Direct

Name: 49186430

Synonym: BAS3426

Alternate gene names: NA

Gene position: 3398219-3398647 (Clockwise)

Preceding gene: 49186428

Following gene: 49186434

Centisome position: 64.99

GC content: 35.66

Gene sequence:

>429_bases
TTGAATATTGAGCAACAATTATATGATGTGGTGAAACAGTTAATTGAACAAAGATATCCAAACGATTGGGGTGGGGCCGC
AGCGATTCGTGTAGAAGATGGAACAATTTATACAAGTGTTGCTCCGGACGTAATAAATGCTTCAACAGAACTTTGTATGG
AAACAGGTGCAATTTTAGAAGCTCATAAATTTCAAAAGAAAGTTACACATTCTATTTGTCTTGCAAGAGAAAATGAGCAT
TCTGAATTAAAGGTACTCTCGCCTTGTGGTGTATGCCAAGAACGTTTATTTTATTGGGGACCAGAAGTACAGTGTGCGAT
TACAAATGCTAAACAAGATATTATTTTTAAACCTTTAAAAGAGTTGCAACCATATCATTGGACAGAAGCATATCATGATG
AAATGGTAAAAGAATGGAGTACGAGATAG

Upstream 100 bases:

>100_bases
AATTAAATGTTCATTCCATTTTTTTGTTTATGTTATTATGATAAAAGAAAGAATATTTCGAAATAACAAACCTGAATTTG
GACAGAAATGAGGAAAAAAA

Downstream 100 bases:

>100_bases
GGAAATAAGTTCTATTATTTTCCTGATGACAATAAAAAAATGTCACGGCCTTTTTCAAATAAAACATCGGAAAAGGCGGT
GACATAACACTTATTTTATA

Product: cytidine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPDVINASTELCMETGAILEAHKFQKKVTHSICLARENEH
SELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKELQPYHWTEAYHDEMVKEWSTR

Sequences:

>Translated_142_residues
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPDVINASTELCMETGAILEAHKFQKKVTHSICLARENEH
SELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKELQPYHWTEAYHDEMVKEWSTR
>Mature_142_residues
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPDVINASTELCMETGAILEAHKFQKKVTHSICLARENEH
SELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKELQPYHWTEAYHDEMVKEWSTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16357; Mature: 16357

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPDVINASTELCMETGAILE
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHH
AHKFQKKVTHSICLARENEHSELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLK
HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
ELQPYHWTEAYHDEMVKEWSTR
HCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPDVINASTELCMETGAILE
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHH
AHKFQKKVTHSICLARENEHSELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLK
HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
ELQPYHWTEAYHDEMVKEWSTR
HCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA