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The map label for this gene is yndE [H]

Identifier: 49186375

GI number: 49186375

Start: 3338903

End: 3340000

Strand: Direct

Name: yndE [H]

Synonym: BAS3370

Alternate gene names: 49186375

Gene position: 3338903-3340000 (Clockwise)

Preceding gene: 49186374

Following gene: 49186376

Centisome position: 63.86

GC content: 34.7

Gene sequence:

>1098_bases
GTGACAAAGCGTGCAAAGAGGGAGATTAGTTTATTTCAATACATTTTAACGATTAGTGGTGTTCAAGTAGGATTCGGTGT
CCTTACACTTCCGCGTGAAGTTGCACAAGGTGCGAATACAGATGGCTGGATGTCTATTATTATCGGATGCGTTATCACTA
CTTTAGTCAGTTTATGTATTGTAAAAATTATGGAAAAGCATCCTGGATATACTTTACTTGATGTGCTGACTCGTTATCTT
GGAAAGTGGCTAGGAAGAATAGGAATGATTTTTTGGATCTTATATGCTGTACTTGCAGCCGTTTCCTTAGTTTTTTCCCT
CCTGTATGTTATTCACATTTGGATTTTACCTAGATCTCCTATGTTTTTAATTATGATTTTGCTTTCTATTCCAATGCTTA
TGCTTGCATGTAAAGGTGTACTTATTATTAGTCGCTTTGCCGTTTTCACTGTGATTTTTACCCTTTGGATGCCATTACTA
TTGTTTATTCCTCTTAAAGATGGTCATTGGATATATCTTCTTCCCTTTCTAAAGGAAGGGTGGATACCAGTTGTAACCAC
AGTTAAATCAACTATCATTGCGTTTCTCGGATTCGAGTTTGCATTCGTCCTTTACCCCTATCTAACTAACAAACCAGCTG
CAAAAAAAGGAATCATTATTGCAAATATGATTACGCTATGCGTTTACCTACAAGTTACATTCGTTTCTTTCGTTTATTTT
AGCCCAGATGGTATAACTAAGTTTTTATGGCCGACTCTTTCTCTTGTTACACCATTTCACTTTTCATTTCTAGAACGATT
TGAAATTATCTTTTTATCATTTTATCTCTTCATTATTTTCGATTCTTGTATTCCTTATATTTTCACTGCTTCAGATGGAA
TCAATCAATTACTTAACAAAAAAGGGAGTCCATTACCTGTTTGGATTTTATTATTCGGATGCATTTTCGTTCTATTCTTT
TATATCCCTTCCTCTTACCAAATAAGTGCGTTGCGAGAATTTTGGGGAACTGCCAGTTATTTTATCGTTTTTCTATTCCC
AGTCGTATTTCTCTTATACATGACACTTTATCTGCATTGGAAAAGGAGAAAAATTTAA

Upstream 100 bases:

>100_bases
TTGTACGTTTACCATGGAAAATAATGAAGAAACGCCCACTATCTCTTAACTTAAAACAAGAAAATCGACAAAGTGATATA
GAAGAAATGGAGGAAGATAA

Downstream 100 bases:

>100_bases
ATGAGGCGCTTTATTCATTTCACTATACTTTGCTTTCTCATAACCTTATTAACAGGCTGTGGAGATCGGCTAGACTTAGA
AAAACAATCCATTTCATTAA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MTKRAKREISLFQYILTISGVQVGFGVLTLPREVAQGANTDGWMSIIIGCVITTLVSLCIVKIMEKHPGYTLLDVLTRYL
GKWLGRIGMIFWILYAVLAAVSLVFSLLYVIHIWILPRSPMFLIMILLSIPMLMLACKGVLIISRFAVFTVIFTLWMPLL
LFIPLKDGHWIYLLPFLKEGWIPVVTTVKSTIIAFLGFEFAFVLYPYLTNKPAAKKGIIIANMITLCVYLQVTFVSFVYF
SPDGITKFLWPTLSLVTPFHFSFLERFEIIFLSFYLFIIFDSCIPYIFTASDGINQLLNKKGSPLPVWILLFGCIFVLFF
YIPSSYQISALREFWGTASYFIVFLFPVVFLLYMTLYLHWKRRKI

Sequences:

>Translated_365_residues
MTKRAKREISLFQYILTISGVQVGFGVLTLPREVAQGANTDGWMSIIIGCVITTLVSLCIVKIMEKHPGYTLLDVLTRYL
GKWLGRIGMIFWILYAVLAAVSLVFSLLYVIHIWILPRSPMFLIMILLSIPMLMLACKGVLIISRFAVFTVIFTLWMPLL
LFIPLKDGHWIYLLPFLKEGWIPVVTTVKSTIIAFLGFEFAFVLYPYLTNKPAAKKGIIIANMITLCVYLQVTFVSFVYF
SPDGITKFLWPTLSLVTPFHFSFLERFEIIFLSFYLFIIFDSCIPYIFTASDGINQLLNKKGSPLPVWILLFGCIFVLFF
YIPSSYQISALREFWGTASYFIVFLFPVVFLLYMTLYLHWKRRKI
>Mature_364_residues
TKRAKREISLFQYILTISGVQVGFGVLTLPREVAQGANTDGWMSIIIGCVITTLVSLCIVKIMEKHPGYTLLDVLTRYLG
KWLGRIGMIFWILYAVLAAVSLVFSLLYVIHIWILPRSPMFLIMILLSIPMLMLACKGVLIISRFAVFTVIFTLWMPLLL
FIPLKDGHWIYLLPFLKEGWIPVVTTVKSTIIAFLGFEFAFVLYPYLTNKPAAKKGIIIANMITLCVYLQVTFVSFVYFS
PDGITKFLWPTLSLVTPFHFSFLERFEIIFLSFYLFIIFDSCIPYIFTASDGINQLLNKKGSPLPVWILLFGCIFVLFFY
IPSSYQISALREFWGTASYFIVFLFPVVFLLYMTLYLHWKRRKI

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 42075; Mature: 41944

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRAKREISLFQYILTISGVQVGFGVLTLPREVAQGANTDGWMSIIIGCVITTLVSLCI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VKIMEKHPGYTLLDVLTRYLGKWLGRIGMIFWILYAVLAAVSLVFSLLYVIHIWILPRSP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
MFLIMILLSIPMLMLACKGVLIISRFAVFTVIFTLWMPLLLFIPLKDGHWIYLLPFLKEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCC
WIPVVTTVKSTIIAFLGFEFAFVLYPYLTNKPAAKKGIIIANMITLCVYLQVTFVSFVYF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SPDGITKFLWPTLSLVTPFHFSFLERFEIIFLSFYLFIIFDSCIPYIFTASDGINQLLNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHC
KGSPLPVWILLFGCIFVLFFYIPSSYQISALREFWGTASYFIVFLFPVVFLLYMTLYLHW
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
KRRKI
HHCCC
>Mature Secondary Structure 
TKRAKREISLFQYILTISGVQVGFGVLTLPREVAQGANTDGWMSIIIGCVITTLVSLCI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VKIMEKHPGYTLLDVLTRYLGKWLGRIGMIFWILYAVLAAVSLVFSLLYVIHIWILPRSP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
MFLIMILLSIPMLMLACKGVLIISRFAVFTVIFTLWMPLLLFIPLKDGHWIYLLPFLKEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCC
WIPVVTTVKSTIIAFLGFEFAFVLYPYLTNKPAAKKGIIIANMITLCVYLQVTFVSFVYF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SPDGITKFLWPTLSLVTPFHFSFLERFEIIFLSFYLFIIFDSCIPYIFTASDGINQLLNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHC
KGSPLPVWILLFGCIFVLFFYIPSSYQISALREFWGTASYFIVFLFPVVFLLYMTLYLHW
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
KRRKI
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]