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The map label for this gene is yfkQ [H]

Identifier: 49186374

GI number: 49186374

Start: 3337368

End: 3338906

Strand: Direct

Name: yfkQ [H]

Synonym: BAS3369

Alternate gene names: 49186374

Gene position: 3337368-3338906 (Clockwise)

Preceding gene: 49186355

Following gene: 49186375

Centisome position: 63.83

GC content: 37.43

Gene sequence:

>1539_bases
ATGGGGCCTTTTAATAAATGGATACGTGGTGAAAAATCTTTTTCTGGACAAGAGCAAGCTGATCACATATTAAATAAATC
TATCTCTTCTTCCCTTTCCCTTAATTTAAAGCACTTGTCCAAATTGTTTAGTGGTATTCCAGAATTAATTACACGCACTT
TTCCGTTAAAAAACGGAAAAGAAGCTGCTCTTATATATATGGAAGGACTTGTAGATAAAACTGTTATTAATGTAGATATT
CTTCGTCCCCTCTTATTTAAAGAATGGAATGAGGACGATTTTTGGGAATCTTCTATTTCTATCGGAAATATTAAAGAAGT
TCAGAAGTGGACAGACATTGAACAATCTCTTTTACATGGAAAAAGCATTTTATTTATAAACGGGCAACTATCCGCTTTAG
AACTAGATACACAAGCGGCACCAAAAAGAAGTATTGAAGAACCTACAACCGAGAGCTCACTAAAAAGCTCACACGAAGGA
TTTAATGAAGTCGCGAGCGACAGTATCGCTCTTATTCGCCGATATATTCCAAATCGCGAATTAAAAGTGAAAGCGTTCAC
TGTCGGTGAGCGGGCCGCTTCTAAAGTTTTTATGCTTTATTTAGCAGATGTTGCAAACGAAGATGTCATACAAGAAATGT
CATGCCGCATCGAATCCATTAAAGTGGATGCCATTCTTACTACCGGTGAATTAGAAGGGTTTGTTGAAGACAATTCTTAT
ACTCTTTTTCCGCAATTATCAATAACTGAACGCCCTGACACAACAGCACATCATATTCTAGATGGGCGAATTGCTGTTGT
TGTAGATCGCTCACCAGGCGTATTAATAGGACCTATGACCTTTTCATCCTTTTTTCAAACGATAGATGATTACAGCTTCA
GACCAATGATTCCATCTTTTATACGCTTACTTCGTTTCACTGGATTATTTATTGCAATTTTTGCTCCTGCTCTTTATATT
GCCATGATTTCCTTTCATTATGAAGTGATTCCACTTAAATTATTGTTAACGATTGGAGAATCGCGAGCTAAAATTCCTTT
TCCCCCTATATTAGAAGCACTTTTAATGGAATTAGTACTGGAAATGCTCCGCGAAGCTGCAGTTCGACTTCCTGGTCCCG
TTGGACAAACGATTGGCGTCGTAGGAGGGATCGTCATTGGACAAGCTGCAGTTCAAGCAGGAATAGTAAGTAATGTCATG
GTTATCGTCGTATCTATTACTGCAGTCGCTTCTTTTATCATTCCTAACCTGGAAATGTCAGCAGGAATTCGCCTTCTTCG
CTTTCCGATGATGATAATTGCCTCTTTATTTGGTGTCATAGGAATTATGGTTGGGATGGCAATCATTATTATTCATATAC
TTTCTATGGAATCTCTTGGTGTTCCTTATGGTAGTCCTTTTTCTCCGTTATTTGCTTCGGATTTAAAAGATATTCTTGTA
CGTTTACCATGGAAAATAATGAAGAAACGCCCACTATCTCTTAACTTAAAACAAGAAAATCGACAAAGTGATATAGAAGA
AATGGAGGAAGATAAGTGA

Upstream 100 bases:

>100_bases
AAAGTTAAAAATATACAATATAAAATTTAAACTACGCATATGTCCGTATGTAACTATCCATAATAAACCATATAAAACAT
AACAAGGAGTAAGCGAATAA

Downstream 100 bases:

>100_bases
CAAAGCGTGCAAAGAGGGAGATTAGTTTATTTCAATACATTTTAACGATTAGTGGTGTTCAAGTAGGATTCGGTGTCCTT
ACACTTCCGCGTGAAGTTGC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MGPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFPLKNGKEAALIYMEGLVDKTVINVDI
LRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHGKSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEG
FNEVASDSIALIRRYIPNRELKVKAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
TLFPQLSITERPDTTAHHILDGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPMIPSFIRLLRFTGLFIAIFAPALYI
AMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVLEMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVM
VIVVSITAVASFIIPNLEMSAGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK

Sequences:

>Translated_512_residues
MGPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFPLKNGKEAALIYMEGLVDKTVINVDI
LRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHGKSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEG
FNEVASDSIALIRRYIPNRELKVKAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
TLFPQLSITERPDTTAHHILDGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPMIPSFIRLLRFTGLFIAIFAPALYI
AMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVLEMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVM
VIVVSITAVASFIIPNLEMSAGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK
>Mature_511_residues
GPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFPLKNGKEAALIYMEGLVDKTVINVDIL
RPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHGKSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEGF
NEVASDSIALIRRYIPNRELKVKAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSYT
LFPQLSITERPDTTAHHILDGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPMIPSFIRLLRFTGLFIAIFAPALYIA
MISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVLEMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVMV
IVVSITAVASFIIPNLEMSAGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILVR
LPWKIMKKRPLSLNLKQENRQSDIEEMEEDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56919; Mature: 56788

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFPLKNGK
CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCCC
EAALIYMEGLVDKTVINVDILRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHG
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCC
KSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEGFNEVASDSIALIRRYIPNRE
CEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKVKAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
EEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCE
TLFPQLSITERPDTTAHHILDGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPMIPSF
EEEEEEEECCCCCCHHHHEECCEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCHHHH
IRLLRFTGLFIAIFAPALYIAMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
EMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVMVIVVSITAVASFIIPNLEMS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK
HCCHHHHHCCCCEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GPFNKWIRGEKSFSGQEQADHILNKSISSSLSLNLKHLSKLFSGIPELITRTFPLKNGK
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCCC
EAALIYMEGLVDKTVINVDILRPLLFKEWNEDDFWESSISIGNIKEVQKWTDIEQSLLHG
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCC
KSILFINGQLSALELDTQAAPKRSIEEPTTESSLKSSHEGFNEVASDSIALIRRYIPNRE
CEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKVKAFTVGERAASKVFMLYLADVANEDVIQEMSCRIESIKVDAILTTGELEGFVEDNSY
EEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCE
TLFPQLSITERPDTTAHHILDGRIAVVVDRSPGVLIGPMTFSSFFQTIDDYSFRPMIPSF
EEEEEEEECCCCCCHHHHEECCEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCHHHH
IRLLRFTGLFIAIFAPALYIAMISFHYEVIPLKLLLTIGESRAKIPFPPILEALLMELVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
EMLREAAVRLPGPVGQTIGVVGGIVIGQAAVQAGIVSNVMVIVVSITAVASFIIPNLEMS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AGIRLLRFPMMIIASLFGVIGIMVGMAIIIIHILSMESLGVPYGSPFSPLFASDLKDILV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLPWKIMKKRPLSLNLKQENRQSDIEEMEEDK
HCCHHHHHCCCCEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]