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The map label for this gene is ymaE [H]

Identifier: 49186217

GI number: 49186217

Start: 3187880

End: 3188707

Strand: Reverse

Name: ymaE [H]

Synonym: BAS3212

Alternate gene names: 49186217

Gene position: 3188707-3187880 (Counterclockwise)

Preceding gene: 49186218

Following gene: 49186214

Centisome position: 60.99

GC content: 38.89

Gene sequence:

>828_bases
ATGATGAAAAATTTCGTTTGTACAACGTGCGGCGTGCAGTATGCAGCGAGTGTAGAAGAACCGGTGAGTTGTCATATTTG
TGATGAAGAGAGACAATATGTGAATCCGAAAGGGCAGTCTTGGACGACACTAGAAAGCTTACAAACAAGTAATACATATA
AAAATGAAATAATCGAAGAGGAAAATGGGCTTTATAGTATTACAACAAAACCAGGATTTGCGATCGGTCAAACGGCATAT
GTAGTGAAAACAGATTCATATCGTTTACTGTGGGACTGTATTACTTATTTAGATGAAACGACAATTGCGAAAATAAAAGA
GCTTGGTGGATTAGATGCGATTGCATTATCTCACCCGCATTATTATTCAACGCAAGTAGAATGGGCGGAGACATTTGATG
TACCAATTTATATACACGAAGATGATAAAGAGTGGGTGATGCGTCCGAGTAGTCGTATTATTTATTGGTCTGGTGAGTCT
TTACAATTAGCGGATGGGATTACTATACATCGTCTGGGAGGACATTTTAGTGGCGGTTCTGTATTGCATTGGGAAGAAGG
TAATGACGGAAAAGGGATTTTGTTAACAGGTGATATTATTCAAGTTGTAGCGGATGAACGATGGGTAAGCTTTATGTACA
GCTATCCAAACTTAATTCCATTACCAGCGAGAAAAGTGGAAGAAATGGTGAATCGAGTGAAGCCGTTACAGTTTAATCGT
CTATACAACGCTTTTCATCGCGTAGTAAAAGAGAATGCAAATGAGGCAGTGGAGCGTTCTGCTGAAAGATATATTAAGGC
GGTAGAAGGAAAGTTGTTTTATACGTAA

Upstream 100 bases:

>100_bases
GTTTATTTACTTACTTTTATAAGTTTATTAATTGAAAACAAAAAAGCAAATCAGTATCAACAAAAATCAGCTTAATAAAA
ATAGAGGGAGAGGGAGAATT

Downstream 100 bases:

>100_bases
AAGTAATTTGATAAGCGGCAATGCACTGTATGATTTGCTGTTTTTATAACACTGAAATGTCATTACTTGTCGGTAAGTCG
ATCTTCTTTATCGAAACGTC

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MMKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSNTYKNEIIEEENGLYSITTKPGFAIGQTAY
VVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHYYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGES
LQLADGITIHRLGGHFSGGSVLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNR
LYNAFHRVVKENANEAVERSAERYIKAVEGKLFYT

Sequences:

>Translated_275_residues
MMKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSNTYKNEIIEEENGLYSITTKPGFAIGQTAY
VVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHYYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGES
LQLADGITIHRLGGHFSGGSVLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNR
LYNAFHRVVKENANEAVERSAERYIKAVEGKLFYT
>Mature_275_residues
MMKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSNTYKNEIIEEENGLYSITTKPGFAIGQTAY
VVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHYYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGES
LQLADGITIHRLGGHFSGGSVLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNR
LYNAFHRVVKENANEAVERSAERYIKAVEGKLFYT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31439; Mature: 31439

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSNTYKNEIIEE
CCCCEEEHHCCCHHHCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHC
ENGLYSITTKPGFAIGQTAYVVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPH
CCCEEEEECCCCCEECCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCC
YYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESLQLADGITIHRLGGHFSGGS
EECCEEEEHEECCEEEEEECCCHHHHCCCCCEEEEECCCEEEEECCEEEEECCCCCCCCC
VLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNR
EEEECCCCCCCEEEEECHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHH
LYNAFHRVVKENANEAVERSAERYIKAVEGKLFYT
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MMKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSNTYKNEIIEE
CCCCEEEHHCCCHHHCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHC
ENGLYSITTKPGFAIGQTAYVVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPH
CCCEEEEECCCCCEECCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCC
YYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESLQLADGITIHRLGGHFSGGS
EECCEEEEHEECCEEEEEECCCHHHHCCCCCEEEEECCCEEEEECCEEEEECCCCCCCCC
VLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNR
EEEECCCCCCCEEEEECHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHH
LYNAFHRVVKENANEAVERSAERYIKAVEGKLFYT
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]