Click here to switch to the map view.

The map label for this gene is nylB [H]

Identifier: 49186106

GI number: 49186106

Start: 3080865

End: 3082124

Strand: Direct

Name: nylB [H]

Synonym: BAS3101

Alternate gene names: 49186106

Gene position: 3080865-3082124 (Clockwise)

Preceding gene: 49186105

Following gene: 49186110

Centisome position: 58.92

GC content: 36.59

Gene sequence:

>1260_bases
ATGAAACTAAAAAAATCTCCCCTACTCTTACTCATAATCACATTCATATTTGTAATTACAGGGCTCGGTTTTACATACTT
CAAACATAATAAAACGACTCCATCGAAAAATAACGTGACGAAGAAAAATTGGTTAGATGACCCTTACTTACGTTGGTCAT
ACACACATATGAAAGAATTTACTTTAATTAATGATGTAAAAAACAATCCTGATCAAATTGCTCGCTTCCCATCCGCATTG
CAAAATTTAGACGATTTTGCTGTGCAGCGTAGATTTGGAAGTGCAACTCCTCTAAAAGAACTTTTAGACGATAACAAAAC
AGATGCGTTTGTCGTTGTACATAATGGACAACTTGTTTATGAACGATATTTCAATGGCTATAACGAGAGCGAACCGCATG
GTATGGCGTCATTAGCAAAGGTATTTACCGGAGCAATAATACAATCTCTCGCTGAAGAAAACCGTATTGACTTAGAAAAA
ACGGCTGACACATATATAAAAGAATTAAAAAATACACCATTTGGAAAAGCAACACTACAGCAATTAATGGACATGCAAGT
TTCAGTAGAATACCCTACTCACGGATACGAACATCCAGCGTTAGAAAATCAAGATGCACAACTATACTTGGCAAGCAATA
TTTTACCTCGAGATAAAAATTACGATGGTCCAATGAAAATTTATGATATGTTACAAGAAGCAAAAGAAACTGCACCGCCT
GGTTCTGTCTTTTCTTACAATAACGGATCAACAGAAACACTCGCTTGGATTATTCGAACGATCACTGGTAAATCATTAGC
TGAAAATGTTAGCGAGCGCATATGGTCTCAAATTGGTATGGAAGAAAACGCGTATTACGTTACAGATGAAACAAAAATAG
AACAAGCGAGCGCTGGTTTAAATGCAACTGCTAGAGATATGGCGAGATTTGGACAATTATTATTAAACAACGGGGAATAT
AACGGAAAACAAATTCTACCTTCTTCTATTACTGAAGATATAAAAAATGTGCAAGAAGGTGAACTTGCAATTGGCCCTGG
TGCTTCCATCTCTTATCATAATCAATGGTGGATTCCGCACAATGAACAAGGTGCTTTTGAAGTGTTAGGTAGTTACGGAC
AAACACTTTACATCGATCCGAAAGCAAAGATGGTCATTGTCCACTTCTCTTCTAACGCTACGCCAAGTAATGAAATACAT
TCCGTTTACTCCAATATGTATATTGATATTGCACATCATTTGGAGAAGCTTCCACAGTAG

Upstream 100 bases:

>100_bases
CTTTTATAAGGAAAGTAAACTTCCCCGTTTACTTTCCTTATTTTGTATTTCTTTCAAGAGAAGCGTATACTTATAATAGA
AATAAAAAGGAGGGACCGCT

Downstream 100 bases:

>100_bases
TGGAAGCAGGAGTTTAAACCTTACATGTATGATTATTTGATTGAACACACAATCTGTTGTGCTGAAACATCAATATATCT
AAAAAGGAGCTCTCTTCATA

Product: 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEFTLINDVKNNPDQIARFPSAL
QNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEK
TADTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPP
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGLNATARDMARFGQLLLNNGEY
NGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIH
SVYSNMYIDIAHHLEKLPQ

Sequences:

>Translated_419_residues
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEFTLINDVKNNPDQIARFPSAL
QNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEK
TADTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPP
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGLNATARDMARFGQLLLNNGEY
NGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIH
SVYSNMYIDIAHHLEKLPQ
>Mature_419_residues
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEFTLINDVKNNPDQIARFPSAL
QNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEK
TADTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPP
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGLNATARDMARFGQLLLNNGEY
NGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIH
SVYSNMYIDIAHHLEKLPQ

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 47436; Mature: 47436

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEF
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCCCCCEEEEHHHHHHH
TLINDVKNNPDQIARFPSALQNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCEEEE
ERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFGKATLQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
QLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPP
HHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGL
CCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCC
NATARDMARFGQLLLNNGEYNGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPH
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEECCCC
NEQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIHSVYSNMYIDIAHHLEKLPQ
CCCCHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLKKSPLLLLIITFIFVITGLGFTYFKHNKTTPSKNNVTKKNWLDDPYLRWSYTHMKEF
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCCCCCEEEEHHHHHHH
TLINDVKNNPDQIARFPSALQNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCEEEE
ERYFNGYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFGKATLQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHH
QLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPP
HHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIEQASAGL
CCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCC
NATARDMARFGQLLLNNGEYNGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPH
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEECCCC
NEQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIHSVYSNMYIDIAHHLEKLPQ
CCCCHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 2512123 [H]