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The map label for this gene is ywoH [H]

Identifier: 49186104

GI number: 49186104

Start: 3079115

End: 3079549

Strand: Direct

Name: ywoH [H]

Synonym: BAS3099

Alternate gene names: 49186104

Gene position: 3079115-3079549 (Clockwise)

Preceding gene: 49186100

Following gene: 49186105

Centisome position: 58.89

GC content: 36.78

Gene sequence:

>435_bases
TTGAAAGGATCAACATACATGGACGAAAAACAACATTTTTTTCACATTGTCAGCCAGACTTCTCGGAAGTTTACGAAGAA
ATTTAATGAACGTGTATCTCCCACTGGGTTATTTAGTGCGCAATGGGCTGTAATTTTCCGCATCAATCAAACTGGTTCTT
GTACGCAAACTGAATTGTGCCAGTATTTAAATGTTGAATCACCAACGATGACTCGTACGTTAACACGTATGGAAACGATG
GGCTGGATTATTCGTACAGAAGGAAAAGATCGCCGTGAGAAGCTCATTTCTTTATCAGAAACAGCGATAAAAATGATTCC
GGTATGGCAAGAAGAAGTTGATACTTTCGAAGAAAAGACGCTAGAAGGTATTAACGAAGATGATTTACATCAAGCATTTC
AAGTGTTACAACAAATTATTAAAAACTTAGATTAA

Upstream 100 bases:

>100_bases
TGTTCTCAACATAAAAGCTATACGAAATTTTTACATAAATCAACATGTCTATTACTAGACAATTATAATAAAAAAGTATA
TAGTTAGCTAGGTAACTAAT

Downstream 100 bases:

>100_bases
ATTGGAGGGATGACAATGCAAAGTGAAAAACTTTGGACGAAGGATTTCCTCGGAACTTGTTTTAGTAGTCTCTTTCTCTT
TTTAACATTTTACATGCTAA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKGSTYMDEKQHFFHIVSQTSRKFTKKFNERVSPTGLFSAQWAVIFRINQTGSCTQTELCQYLNVESPTMTRTLTRMETM
GWIIRTEGKDRREKLISLSETAIKMIPVWQEEVDTFEEKTLEGINEDDLHQAFQVLQQIIKNLD

Sequences:

>Translated_144_residues
MKGSTYMDEKQHFFHIVSQTSRKFTKKFNERVSPTGLFSAQWAVIFRINQTGSCTQTELCQYLNVESPTMTRTLTRMETM
GWIIRTEGKDRREKLISLSETAIKMIPVWQEEVDTFEEKTLEGINEDDLHQAFQVLQQIIKNLD
>Mature_144_residues
MKGSTYMDEKQHFFHIVSQTSRKFTKKFNERVSPTGLFSAQWAVIFRINQTGSCTQTELCQYLNVESPTMTRTLTRMETM
GWIIRTEGKDRREKLISLSETAIKMIPVWQEEVDTFEEKTLEGINEDDLHQAFQVLQQIIKNLD

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16884; Mature: 16884

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSTYMDEKQHFFHIVSQTSRKFTKKFNERVSPTGLFSAQWAVIFRINQTGSCTQTELC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
QYLNVESPTMTRTLTRMETMGWIIRTEGKDRREKLISLSETAIKMIPVWQEEVDTFEEKT
HHHCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEGINEDDLHQAFQVLQQIIKNLD
HCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSTYMDEKQHFFHIVSQTSRKFTKKFNERVSPTGLFSAQWAVIFRINQTGSCTQTELC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
QYLNVESPTMTRTLTRMETMGWIIRTEGKDRREKLISLSETAIKMIPVWQEEVDTFEEKT
HHHCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEGINEDDLHQAFQVLQQIIKNLD
HCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]