Click here to switch to the map view.

The map label for this gene is yaaI [H]

Identifier: 49186077

GI number: 49186077

Start: 3053002

End: 3053583

Strand: Reverse

Name: yaaI [H]

Synonym: BAS3072

Alternate gene names: 49186077

Gene position: 3053583-3053002 (Counterclockwise)

Preceding gene: 49186078

Following gene: 49186076

Centisome position: 58.4

GC content: 33.68

Gene sequence:

>582_bases
ATGAAATATGCAGTGCTCACAAATGATTTACAGTACGATTTGGTTAATAAAAATGAGGATAGAATTGCAGCTGTGGAGGC
GTTTACGCCTAAAATGGTGTCTTTCTTAGATACTATGAGAGAAAATGATGTTTCTATTATTCACCTGCAGTTAATTAACT
TAGAAGATGATCCGAAAGCTGAACGATATGGTGATTTTTTACCAGTCACAAAGGGATCTAAAGGTGCAGAAATCTTACCT
GAGTTTCTTCATGAAAAAGATATTATTATGGAGAAAAATAAGGATAGTGGTTTTTTTGAGACAAATCTTGATGAAACCTT
AAAAAAATTAGGAGTAGACACAATTATTATTACGGGTATGCAAACTCAAATTTGTGTCCAAACAACTGCAGCGGATGGAT
TTTTCCGTGGTTATAATGTAATCGTACCAGAAGATGCAGTTGTTTCAGCGAAGGATGAAGATAAGGAACGAGCTTTAAAA
TGGTTAGGTTCATATTGTGCAAAGATTATGAGTATCGAGGAAATCTGTAATTCAATTTCTAAAAATGAAGATATTTCTTT
TGATGGGGTTGCAATTCCTTAA

Upstream 100 bases:

>100_bases
AGATAAAAAATAACATTTGACATATTCTTACTACTGGTGGAATAATGAACATTGTATTTTAGAAAAATTAAATTCTTAGT
TAATTGGAGGTAGGATTATT

Downstream 100 bases:

>100_bases
GTAAATACGTTGTAATATCACTTGTTCTATGTAGCAAGTGATATTATTTTTCAAAAATAAAAATGAAAAGGAGTTTTAAC
AAATGAAATTAACTAAAGAT

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKYAVLTNDLQYDLVNKNEDRIAAVEAFTPKMVSFLDTMRENDVSIIHLQLINLEDDPKAERYGDFLPVTKGSKGAEILP
EFLHEKDIIMEKNKDSGFFETNLDETLKKLGVDTIIITGMQTQICVQTTAADGFFRGYNVIVPEDAVVSAKDEDKERALK
WLGSYCAKIMSIEEICNSISKNEDISFDGVAIP

Sequences:

>Translated_193_residues
MKYAVLTNDLQYDLVNKNEDRIAAVEAFTPKMVSFLDTMRENDVSIIHLQLINLEDDPKAERYGDFLPVTKGSKGAEILP
EFLHEKDIIMEKNKDSGFFETNLDETLKKLGVDTIIITGMQTQICVQTTAADGFFRGYNVIVPEDAVVSAKDEDKERALK
WLGSYCAKIMSIEEICNSISKNEDISFDGVAIP
>Mature_193_residues
MKYAVLTNDLQYDLVNKNEDRIAAVEAFTPKMVSFLDTMRENDVSIIHLQLINLEDDPKAERYGDFLPVTKGSKGAEILP
EFLHEKDIIMEKNKDSGFFETNLDETLKKLGVDTIIITGMQTQICVQTTAADGFFRGYNVIVPEDAVVSAKDEDKERALK
WLGSYCAKIMSIEEICNSISKNEDISFDGVAIP

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081820, Length=117, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081992, Length=113, Percent_Identity=30.9734513274336, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21679; Mature: 21679

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAVLTNDLQYDLVNKNEDRIAAVEAFTPKMVSFLDTMRENDVSIIHLQLINLEDDPKA
CCEEEEECCCEEEECCCCCCCEEEEHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCH
ERYGDFLPVTKGSKGAEILPEFLHEKDIIMEKNKDSGFFETNLDETLKKLGVDTIIITGM
HHCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCHHHHHHHHCCCEEEEECC
QTQICVQTTAADGFFRGYNVIVPEDAVVSAKDEDKERALKWLGSYCAKIMSIEEICNSIS
CCEEEEEECCCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNEDISFDGVAIP
CCCCCCCCCEECC
>Mature Secondary Structure
MKYAVLTNDLQYDLVNKNEDRIAAVEAFTPKMVSFLDTMRENDVSIIHLQLINLEDDPKA
CCEEEEECCCEEEECCCCCCCEEEEHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCH
ERYGDFLPVTKGSKGAEILPEFLHEKDIIMEKNKDSGFFETNLDETLKKLGVDTIIITGM
HHCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCHHHHHHHHCCCEEEEECC
QTQICVQTTAADGFFRGYNVIVPEDAVVSAKDEDKERALKWLGSYCAKIMSIEEICNSIS
CCEEEEEECCCCCCCCCCEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
KNEDISFDGVAIP
CCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]