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The map label for this gene is ytaB [H]

Identifier: 49185960

GI number: 49185960

Start: 2925555

End: 2926016

Strand: Reverse

Name: ytaB [H]

Synonym: BAS2955

Alternate gene names: 49185960

Gene position: 2926016-2925555 (Counterclockwise)

Preceding gene: 49185961

Following gene: 49185959

Centisome position: 55.96

GC content: 29.44

Gene sequence:

>462_bases
ATGTTTATGAAAAATTCTAGTATCATAGTATTTTTACTAACATATGGTTTGTTTTATGTTTCTAGTATTTTATTTCCTAT
TGATCGTATGTGGTACGATGCGCTAGAAAAGCCGTCTTGGACACCTTCTGGCATGACAATCGGAATGATTTGGGCTATAT
TATATGGACTGATTGCATTATCAGTTACAATTATTTATAACAAATATGGATGTAAGCCAAAAACATTTTGGTTTGTATTC
CTTTTAAATTACATATGCAATCAAGCGTTTAGCTATTTTCAATTCAGTCAAAAAAAATTATTTTTAGCAACAGTAGATTG
TTTACTAGTCGCTATTACTACGTTGCTTCTCATAGCGGTTTCTTCCAAATTATCTAAAGTATCGACATGGTTGCTAATTC
CATATTTTTTATGGTCTACATTTGCTACATATTTATCTTGGACAATTTATAGTATAAATTAA

Upstream 100 bases:

>100_bases
TTAAACAATATGTATTTAAAATTTAAATATTAGAATTTTATCCATTACAAGGACATACTAATCATATAAAGTTTCTAAAA
CCTTCTATTGAAAAAGGAGA

Downstream 100 bases:

>100_bases
AGACGTAAATGAAAACTTGAGCACAATAAAAATGCTCGAGTTTTTATGTTTATTAATGGTAATCTAAAATATAGAATATA
TACATCTTAGGGAGGTCATC

Product: TspO/MBR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MFMKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSVTIIYNKYGCKPKTFWFVF
LLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN

Sequences:

>Translated_153_residues
MFMKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSVTIIYNKYGCKPKTFWFVF
LLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
>Mature_153_residues
MFMKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSVTIIYNKYGCKPKTFWFVF
LLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 17773; Mature: 17773

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SVTIIYNKYGCKPKTFWFVFLLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MFMKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SVTIIYNKYGCKPKTFWFVFLLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]